Basic Information | |
---|---|
Species | Glycine max |
Cazyme ID | Glyma04g00610.1 |
Family | GH10 |
Protein Properties | Length: 558 Molecular Weight: 63210.4 Isoelectric Point: 5.896 |
Chromosome | Chromosome/Scaffold: 04 Start: 353967 End: 357709 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH10 | 213 | 488 | 0 |
SKDFPFGSAIAKTILGNLPYQNWFVKRFNAAVFENELKWYATEPDEGKVNYTISDQMLQFVRTNNIIARGHNIFWENPKYTPPWVLNLTGTKLQSAVNSR IHSLMSQYKDEFIHWDVSNEMLHFNFYEERLGPDATLHFFETAHESDPLATLFMNDFNVVETCSDVKSTVDAYISRVRELQRNGIFMDGIGLEGHFTIPN PPLIRAILDKLATLGLPIWLTEVDISKTLDRDAQANYLEEVLREGFSHPSVNGIMLWTAFHPNGCYQMCLTDNNFK |
Full Sequence |
---|
Protein Sequence Length: 558 Download |
MQDIPFCSLI VFFFLIGASL VSPLYDGPLY DSTAYAECKE KPEEPLYGGG LFNTRRGVEG 60 TIDSSISNVA NNSYVPSLVL YNLTQGTIYS FSAWVRVKGS SSAMVRTTLE TEKETHDCIG 120 TVSAKHECWS FLKGGFVLNW SSNLSMIFFQ NADGKDINID VASPSLQPFT KQQWRINQQY 180 KINTQRKRAV TIHVSDSNGR RFQGASICIE QISKDFPFGS AIAKTILGNL PYQNWFVKRF 240 NAAVFENELK WYATEPDEGK VNYTISDQML QFVRTNNIIA RGHNIFWENP KYTPPWVLNL 300 TGTKLQSAVN SRIHSLMSQY KDEFIHWDVS NEMLHFNFYE ERLGPDATLH FFETAHESDP 360 LATLFMNDFN VVETCSDVKS TVDAYISRVR ELQRNGIFMD GIGLEGHFTI PNPPLIRAIL 420 DKLATLGLPI WLTEVDISKT LDRDAQANYL EEVLREGFSH PSVNGIMLWT AFHPNGCYQM 480 CLTDNNFKNL PAGDVVDKLV EEWQISRVEG VTDVHGSYSF YGFLGEYRIS VKYGNKTTKS 540 TFSLSRGDET RHFTITI* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3693 | XynA | 4.0e-42 | 211 | 469 | 282 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 6.0e-67 | 210 | 469 | 276 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 3.0e-81 | 249 | 496 | 269 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF94921.1 | 0 | 9 | 557 | 12 | 558 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
EMBL | CBI37893.1 | 0 | 12 | 557 | 82 | 625 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_195577.2 | 0 | 26 | 557 | 30 | 562 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
RefSeq | XP_002277675.1 | 0 | 20 | 557 | 19 | 549 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002534153.1 | 0 | 92 | 557 | 8 | 473 | Endo-1,4-beta-xylanase A precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v6y_A | 2e-30 | 218 | 469 | 16 | 275 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g4f_B | 6e-30 | 218 | 469 | 16 | 266 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g4f_A | 6e-30 | 218 | 469 | 16 | 266 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g3j_A | 6e-30 | 218 | 469 | 16 | 266 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g3i_A | 6e-30 | 218 | 469 | 16 | 266 | A Chain A, Structure Of S.Olivaceoviridis Xylanase Q88aR275A MUTANT |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |