| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.002G195600.1 |
| Family | GH10 |
| Protein Properties | Length: 612 Molecular Weight: 69530.5 Isoelectric Point: 5.3471 |
| Chromosome | Chromosome/Scaffold: 02 Start: 52964388 End: 52969027 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH10 | 280 | 355 | 3.9e-22 |
| SKDFPFGSAIAHTILGNLPYQNWFVERFNAAVFENELKWYATEPDQGKTNYTLADQMLEFVRAHQIIARGHNIFWE | |||
| GH10 | 168 | 257 | 1e-23 |
| SKDFPFGSAIAHTILGNLPYQNWFVERFNAAVFENELKWYATEPDQGKTNYTLADQMLEFVRAHQIIARGHNIFWEDPKYTPAWQRKRAV | |||
| GH10 | 359 | 528 | 5.5e-35 |
| IQSLMSKYKEEFIHWDVSNEMLHFDFYEQRLGPDATLHFYETAHQSDPLTAHQSDPLATLFTNEFNVVETCSDVKSTVDTYIERIRELERGGMYMDGIGL ESHFTVPNLPLMRAVIDKLATLRLPIWLTEVDISSSVGKELQGVYLEQVLREGFSHPSVNGIMLWTALHP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 612 Download |
| MKHSLVFGGF WAFFILLSGS LVASYGSLSL STFGLTVQNI LMGFSENLNG PLYDFTAYTE 60 CKAQPEEPLY QGGILKDEPP IMRPAIFGKT ATGFYTPAFL LKNLTNSDDK DIDITIDSSS 120 LQSFTDQEWR FNQQFMINTQ RKRAVTIHVS DQQGNRLQGA AITINQVSKD FPFGSAIAHT 180 ILGNLPYQNW FVERFNAAVF ENELKWYATE PDQGKTNYTL ADQMLEFVRA HQIIARGHNI 240 FWEDPKYTPA WQRKRAVTIH VSDQQGNRLQ GAAITINQVS KDFPFGSAIA HTILGNLPYQ 300 NWFVERFNAA VFENELKWYA TEPDQGKTNY TLADQMLEFV RAHQIIARGH NIFWEDPKIQ 360 SLMSKYKEEF IHWDVSNEML HFDFYEQRLG PDATLHFYET AHQSDPLTAH QSDPLATLFT 420 NEFNVVETCS DVKSTVDTYI ERIRELERGG MYMDGIGLES HFTVPNLPLM RAVIDKLATL 480 RLPIWLTEVD ISSSVGKELQ GVYLEQVLRE GFSHPSVNGI MLWTALHPKG CYEMCLTDEN 540 FKNLPAGDVV DKLLKEWESG EMKGVTGEHG SYSFYGFLGE YKVNVGYGDR AANFTFSLPR 600 SGETKHFSIH L* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00633 | Glyco_10 | 5.0e-11 | 204 | 254 | 51 | + Glycosyl hydrolase family 10. | ||
| pfam00331 | Glyco_hydro_10 | 6.0e-18 | 168 | 251 | 85 | + Glycosyl hydrolase family 10. | ||
| COG3693 | XynA | 2.0e-28 | 276 | 492 | 248 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 2.0e-44 | 280 | 523 | 279 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 2.0e-58 | 316 | 550 | 275 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI37893.1 | 0 | 106 | 253 | 219 | 366 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI37893.1 | 0 | 252 | 611 | 253 | 625 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002277675.1 | 0.00000003 | 49 | 105 | 24 | 76 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002277675.1 | 0 | 106 | 253 | 143 | 290 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002277675.1 | 0 | 252 | 611 | 177 | 549 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1tux_A | 1e-18 | 300 | 554 | 24 | 301 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1tux_A | 0.0007 | 188 | 251 | 24 | 94 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1v6y_A | 5e-18 | 285 | 523 | 16 | 275 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
| PDB | 1v6y_A | 0.000004 | 173 | 251 | 16 | 92 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
| PDB | 3w24_A | 1e-17 | 283 | 492 | 17 | 255 | A Chain A, The High-resolution Crystal Structure Of Tsxyla, Intracellular Xylanase From Thermoanaerobacterium Saccharolyticum Jw/sl-ys |
