Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna25505.1-v1.0-hybrid |
Family | GH10 |
Protein Properties | Length: 1583 Molecular Weight: 177770 Isoelectric Point: 6.2141 |
Chromosome | Chromosome/Scaffold: Start: 6189088 End: 6199945 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH10 | 226 | 484 | 0 |
PSFPFGCAITSLILNNPIHQKWFTSRFTVTTFGDEMKWYSTESIQGREDYSVADAMLQFAQQNNIAVRGHNVFWDDSQYQLGWVKSLDTHQLVNATYKRL NSIMQRYKSKLIAWDVVNENLHWNFFESKMGPNASAIFYNWAIKADGETPLFLNDFNTIEESRDGASTPAMYLRKLREIQSFPGNSGGGFGIGLESHFSS STPNLPYIRASIDTLGAANVPIWITELDVASHLDQPYYLEQLLRELHSHPRIQGIIMWA | |||
GH10 | 713 | 976 | 0 |
KGGSFPFGCAMDKLILSNTAYQNWFTSRFRLTTFENEMKWYSTETSEGHQDYSVPDAMLRFAKQHNIAVRGHNVFWDDPQHQQGWLKSLPTKRLATDAYW RARNIVKRYKGQLIAWDVVNENLHFNFFESRMGPLASGIMYNWALKADGATPLFLNEYNTIEDSRDWKASPKAYINRLRGIQRVLDNYKGRFGIGLESHF VTPNIPYIRASIDYLATAKVPIWITELDVQSGPNQALYLEQILRELHSHPQVQGIVIWSAWQPQ | |||
GH10 | 1230 | 1490 | 0 |
TRSDFPFGCGMNHNILTSTEYQNWFASRFRYTTFTNEMKWYSTEIKQGQENYTIADGMVKFAKENGISIRGHNVFWDNPKMQPRWVNSTLSPEELGTASA KRINSVVARYKGQLIAWDVMNENLHFRFFEDKLGENASAAFYYTAQQLDPGTMMFMNEYNTMEYSSDEASSPANYKKKLEEILSYPGNPNLTAGIGLQGH FGSGQPNLAYMRSVLDFLGATGYPIWLTEVSVGIGPNQAQYLEEVLREAYSHPAVQGIIMF |
Full Sequence |
---|
Protein Sequence Length: 1583 Download |
MKIDGKYSLL LLCTFIFAGS DVKALPYDYS ACIECLANPL KPQYGGGIIT NPEVNDGLKG 60 WSTFGNAELQ HTESQGKKFL VAHSRMQPHD SMSQKVYLQS DKLYTFSAWI QINTGSDVPV 120 AAIFKTASGF KRAGEIIAES NCWSMLKGGL TVEASGTAEL YFESNNTSVE IWVDSISLQP 180 FTEKQWKSHQ DQSIAKNRKS RVRIQAVDAK GEPLPNATVS IQQNVPSFPF GCAITSLILN 240 NPIHQKWFTS RFTVTTFGDE MKWYSTESIQ GREDYSVADA MLQFAQQNNI AVRGHNVFWD 300 DSQYQLGWVK SLDTHQLVNA TYKRLNSIMQ RYKSKLIAWD VVNENLHWNF FESKMGPNAS 360 AIFYNWAIKA DGETPLFLND FNTIEESRDG ASTPAMYLRK LREIQSFPGN SGGGFGIGLE 420 SHFSSSTPNL PYIRASIDTL GAANVPIWIT ELDVASHLDQ PYYLEQLLRE LHSHPRIQGI 480 IMWAGRGHQG CYRMCLTDEN FNNLPTGDVV DKLLQEWGYR SSSSFIADVN GFFEASLPHG 540 DYDMMISQSS TMDFSRCLAN PLKPQYGGGI IVNPELNEGL KGWSTFGNAT MEHRKSENNS 600 FIVAHSRNQP HDSIFQNVHL EIDKLYTFSA WVQVSNGSDV PVTAVFNTPT GFVHAGVTIA 660 ESNCWTMLKG GLTVNASGPA ELYFEIRKSK VKIQAVDAQG NPLPNATISI EQKGGSFPFG 720 CAMDKLILSN TAYQNWFTSR FRLTTFENEM KWYSTETSEG HQDYSVPDAM LRFAKQHNIA 780 VRGHNVFWDD PQHQQGWLKS LPTKRLATDA YWRARNIVKR YKGQLIAWDV VNENLHFNFF 840 ESRMGPLASG IMYNWALKAD GATPLFLNEY NTIEDSRDWK ASPKAYINRL RGIQRVLDNY 900 KGRFGIGLES HFVTPNIPYI RASIDYLATA KVPIWITELD VQSGPNQALY LEQILRELHS 960 HPQVQGIVIW SAWQPQGCYR MCLTDNNFKN LATGNVVDKL LHEWGLRSFE STSAATDANG 1020 FFEASLFHGD YEVTITHPSC LKEPQEALYG GGIIMNPDFN HNMEGWKAFG QGNIEERISK 1080 DGNRFLVAHS RKNASDSFSQ KVQVDQGKIY TFSASVQVSE GSEVVAVVFK FPTGKNIRGG 1140 DMIAEHGCWS LLKGGIVANF TSLVEIHFES KNTSVEIWVD NVSLQPFTKE EWKSHQDKSI 1200 IEQRKSKVRL QVTRANKAPL TGAEVLIKQT RSDFPFGCGM NHNILTSTEY QNWFASRFRY 1260 TTFTNEMKWY STEIKQGQEN YTIADGMVKF AKENGISIRG HNVFWDNPKM QPRWVNSTLS 1320 PEELGTASAK RINSVVARYK GQLIAWDVMN ENLHFRFFED KLGENASAAF YYTAQQLDPG 1380 TMMFMNEYNT MEYSSDEASS PANYKKKLEE ILSYPGNPNL TAGIGLQGHF GSGQPNLAYM 1440 RSVLDFLGAT GYPIWLTEVS VGIGPNQAQY LEEVLREAYS HPAVQGIIMF VGPITAGFNE 1500 TTLVDKNFNN TPSGDVVDKL IAEWKTGSLE LATDDQGYID VSLFHGDYEV TAEDNFASSS 1560 ATLSFKVTKD EPQSIVQVQI DT* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00331 | Glyco_hydro_10 | 1.0e-46 | 1232 | 1517 | 309 | + Glycosyl hydrolase family 10. | ||
pfam00331 | Glyco_hydro_10 | 2.0e-47 | 715 | 970 | 283 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 7.0e-64 | 750 | 997 | 279 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 3.0e-66 | 261 | 510 | 272 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 5.0e-68 | 1267 | 1517 | 273 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1i1x_A | 5e-25 | 1226 | 1517 | 9 | 297 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 1i1x_A | 7e-20 | 230 | 516 | 18 | 303 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 1i1x_A | 4e-19 | 715 | 988 | 14 | 288 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 1i1w_A | 5e-25 | 1226 | 1517 | 9 | 297 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1i1w_A | 7e-20 | 230 | 516 | 18 | 303 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |