Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29693.m002048 |
Family | CBM43 |
Protein Properties | Length: 203 Molecular Weight: 22495.4 Isoelectric Point: 6.9381 |
Chromosome | Chromosome/Scaffold: 29693 Start: 610843 End: 611713 |
Description | glycosyl hydrolase family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 114 | 191 | 2.1e-27 |
WCVAKPMAPPELLLANINYICGEMDCNVIQPTGECYSPDNIISHASVAMNMYYVLHNKSNLSCNFNNTGMVVKNDPSK | |||
CBM43 | 5 | 80 | 1.6e-28 |
WCVAKPTTSETDLQNNLDYACSHADCHSLQKGNVCYCPNNRLHQASYAMNQYYQSQGRTSTNCNFSNSGLIAVTDP |
Full Sequence |
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Protein Sequence Length: 203 Download |
MQKSWCVAKP TTSETDLQNN LDYACSHADC HSLQKGNVCY CPNNRLHQAS YAMNQYYQSQ 60 GRTSTNCNFS NSGLIAVTDP IRLQYNKLPK DALVMRCIAG YGGNEPLATQ TDGWCVAKPM 120 APPELLLANI NYICGEMDCN VIQPTGECYS PDNIISHASV AMNMYYVLHN KSNLSCNFNN 180 TGMVVKNDPS KPTYAAYFSL TFP |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG0136 | Asd | 0.005 | 57 | 138 | 88 | + Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | ||
pfam07983 | X8 | 1.0e-14 | 114 | 183 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
pfam07983 | X8 | 4.0e-18 | 4 | 73 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-25 | 114 | 193 | 81 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
smart00768 | X8 | 2.0e-28 | 4 | 80 | 78 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-16 | 4 | 80 | 12 | 89 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 2jon_A | 0.000000000000009 | 106 | 190 | 5 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
Sequence Alignments (This image is cropped. Click for full image.) |
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