Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29693.m002049 |
Family | CBM43 |
Protein Properties | Length: 216 Molecular Weight: 23862.5 Isoelectric Point: 6.5884 |
Chromosome | Chromosome/Scaffold: 29693 Start: 612963 End: 614659 |
Description | glycosyl hydrolase family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 32 | 113 | 2.5e-28 |
WCIANPSTSNTELIANLDYACSHVGCSLIQQGSSCFYPNNYLHHASFAMNLYYQRSGRHRSDCNFSNSGLISFSDPSFRSCN | |||
CBM43 | 134 | 214 | 3.1e-33 |
WCVAKPATENSMLQENINFACNHVDCTPIQDGGPCYNPTTLVNHASFAMNLYYQTTQRTNTSCDFKGSGLIVNRNPSYGNC |
Full Sequence |
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Protein Sequence Length: 216 Download |
MSISVSTLCM LLMLSCFNSG AYLKVADAQR TWCIANPSTS NTELIANLDY ACSHVGCSLI 60 QQGSSCFYPN NYLHHASFAM NLYYQRSGRH RSDCNFSNSG LISFSDPSFR SCNYETGGGI 120 VESHRSENQT SETWCVAKPA TENSMLQENI NFACNHVDCT PIQDGGPCYN PTTLVNHASF 180 AMNLYYQTTQ RTNTSCDFKG SGLIVNRNPS YGNCTF |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-14 | 31 | 100 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
pfam07983 | X8 | 3.0e-17 | 133 | 202 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-29 | 31 | 114 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
smart00768 | X8 | 1.0e-32 | 133 | 216 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 5e-23 | 129 | 216 | 8 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 2jon_A | 1e-21 | 28 | 117 | 9 | 99 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |