Basic Information | |
---|---|
Species | Ricinus communis |
Cazyme ID | 29753.m000250 |
Family | CBM43 |
Protein Properties | Length: 476 Molecular Weight: 51757.1 Isoelectric Point: 5.6204 |
Chromosome | Chromosome/Scaffold: 29753 Start: 140843 End: 143197 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 388 | 466 | 1.4e-27 |
WCLPKTGADTEALQRNIDYVCGLGAEYCEPIQDNGKCFLPNTVRAHAAFAMNAYYQANGRNAYDCDFEQTGAISSVDPS | |||
GH17 | 31 | 345 | 0 |
LGVNYGTVANNLPPPAQVANFLVESTIINRVRLFDTNREILQAFAHTGIEVTVTVPNDQIPRLTKLNFAQQWVKSNIQPYVPATNIIRILVGNEVISTAN KMLIAGLVPAMQTLHTALVGASLDRKIKVSTPHSLGILSTSSPPSTGKFRQGYDVHVLKPLLSFLRDTNSPFMINPYPFFGCSPDTLDYALFRPNAGVMD DNTKLMYTNMLDGQLDAVFSAIKLLGFTDIDIVIAETGWPSKGDSLQLGVDADSAAHYNGNLMKHVTSGSGTPLMPNRTFETYIFALFNENLKPGPTCER NFGLFQPDMTPVYDI |
Full Sequence |
---|
Protein Sequence Length: 476 Download |
MERESAALYA SMVTAILFLQ STIIPGAEGT LGVNYGTVAN NLPPPAQVAN FLVESTIINR 60 VRLFDTNREI LQAFAHTGIE VTVTVPNDQI PRLTKLNFAQ QWVKSNIQPY VPATNIIRIL 120 VGNEVISTAN KMLIAGLVPA MQTLHTALVG ASLDRKIKVS TPHSLGILST SSPPSTGKFR 180 QGYDVHVLKP LLSFLRDTNS PFMINPYPFF GCSPDTLDYA LFRPNAGVMD DNTKLMYTNM 240 LDGQLDAVFS AIKLLGFTDI DIVIAETGWP SKGDSLQLGV DADSAAHYNG NLMKHVTSGS 300 GTPLMPNRTF ETYIFALFNE NLKPGPTCER NFGLFQPDMT PVYDIGILRP TVAAAANNQH 360 ASSSIPKNPT PVPMVAPPAS SDPEGKRWCL PKTGADTEAL QRNIDYVCGL GAEYCEPIQD 420 NGKCFLPNTV RAHAAFAMNA YYQANGRNAY DCDFEQTGAI SSVDPSMFYT NPCLVF 480 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-20 | 387 | 458 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-32 | 388 | 467 | 80 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 8.0e-97 | 31 | 345 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI23036.1 | 0 | 11 | 466 | 3 | 452 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002271991.1 | 0 | 13 | 474 | 5 | 479 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318439.1 | 0 | 1 | 466 | 1 | 457 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321390.1 | 0 | 30 | 466 | 1 | 419 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526252.1 | 0 | 1 | 476 | 1 | 476 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 31 | 345 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 31 | 345 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 31 | 345 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 0 | 31 | 345 | 3 | 312 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 0 | 31 | 345 | 3 | 312 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |