Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29977.m000251 |
Family | CBM43 |
Protein Properties | Length: 488 Molecular Weight: 53227.5 Isoelectric Point: 7.9661 |
Chromosome | Chromosome/Scaffold: 29977 Start: 37818 End: 39985 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 361 | 443 | 6e-33 |
WCVPKSDASEDALQKNIDYVCSTGVDCRAIQAGGPCFDPNTVRSHASYAMNAYYQTFGRQDYNCDFNHTGRLTNSDPSYEACS | |||
GH17 | 25 | 337 | 0 |
VGVNYGTVANNLPPPSQVAAFLKSQTTINSIKIFDANPDILRAFANTGISVTVTVGNGDIPSLSKLDAAKSWISSNILPFYPQTLIKYIAVGNEILATAD KNLIAHTLPAMKALKSALEIANITAVKVSTPHSLGILSSSEPPSTGRFRKGYDKRIFAPILEYHRQTKSPFMVNPYPYFGFRSETLNYALFKPNGGVFDS ATGKNYTNMFDAQLDAVFSAMKRLGYEDVDIVVAETGWPSAGDPNQPGVSLENALSYNGNLVKHVNSGIGTPLMPNRTFETYLFALFNENLKPTVSEQNF GLFKPDFTPVYDV |
Full Sequence |
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Protein Sequence Length: 488 Download |
MANPYFSPLL LLLILLPSTT ATYTVGVNYG TVANNLPPPS QVAAFLKSQT TINSIKIFDA 60 NPDILRAFAN TGISVTVTVG NGDIPSLSKL DAAKSWISSN ILPFYPQTLI KYIAVGNEIL 120 ATADKNLIAH TLPAMKALKS ALEIANITAV KVSTPHSLGI LSSSEPPSTG RFRKGYDKRI 180 FAPILEYHRQ TKSPFMVNPY PYFGFRSETL NYALFKPNGG VFDSATGKNY TNMFDAQLDA 240 VFSAMKRLGY EDVDIVVAET GWPSAGDPNQ PGVSLENALS YNGNLVKHVN SGIGTPLMPN 300 RTFETYLFAL FNENLKPTVS EQNFGLFKPD FTPVYDVGVL RNPRAKGPTA PAPSSSQGKK 360 WCVPKSDASE DALQKNIDYV CSTGVDCRAI QAGGPCFDPN TVRSHASYAM NAYYQTFGRQ 420 DYNCDFNHTG RLTNSDPSYE ACSYPFDGLK LEENSVAGGS TRLLFRNAVV GCCLIFVNLN 480 LFLFYNLL |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 7.0e-24 | 360 | 430 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-41 | 360 | 444 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 5.0e-93 | 25 | 337 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002283647.1 | 0 | 15 | 444 | 19 | 445 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002298356.1 | 0 | 18 | 438 | 20 | 447 | glycoside hydrolase [Populus trichocarpa] |
RefSeq | XP_002312097.1 | 0 | 9 | 444 | 13 | 447 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530862.1 | 0 | 19 | 446 | 22 | 447 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
RefSeq | XP_002532848.1 | 0 | 1 | 488 | 1 | 488 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 25 | 337 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 25 | 337 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 25 | 337 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 25 | 337 | 2 | 313 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 25 | 337 | 2 | 313 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |