Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30170.m013711 |
Family | CBM43 |
Protein Properties | Length: 458 Molecular Weight: 49763.2 Isoelectric Point: 5.0982 |
Chromosome | Chromosome/Scaffold: 30170 Start: 4300528 End: 4302027 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 371 | 453 | 9.7e-32 |
WCVAKPHADEKVLQAVLDFCCGPGGVDCREIYESGDCFAPDKLHAHASYAMNAYYQMHGRNYWNCDFKGTGLVTFSDPSYGKC | |||
GH17 | 23 | 343 | 0 |
VGVNYGTLGNNLPSPKKVAQLLQSTLIDKVKIYDTNPEILEAFSNTGIDLIVAVENYHVANISSDVSAADEWFANRVVPFIPATSVVAIAVGNEYLTTDP DHLRPNNLVQAMQNLHAVLVARGLDRKIKVTTPHSMAILASSFPPSASTFATTLMPTMTSIVAFLAETGSPFMVNAYPYFAYRDNPDSVDLQYALLGNAT GVRDPAGYIYSNMLDAQIDAVRSAVNSLGFGNQTIDITVSESGWPSKGDPGDTAATPDIARTYNTRLIERAQSNKGTPMKPKDNIEIYVFALFNENKKGG DVSERNFGIFNGDGSKVYEVD |
Full Sequence |
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Protein Sequence Length: 458 Download |
MPPPQLLFLL LLALSPFQKV SAVGVNYGTL GNNLPSPKKV AQLLQSTLID KVKIYDTNPE 60 ILEAFSNTGI DLIVAVENYH VANISSDVSA ADEWFANRVV PFIPATSVVA IAVGNEYLTT 120 DPDHLRPNNL VQAMQNLHAV LVARGLDRKI KVTTPHSMAI LASSFPPSAS TFATTLMPTM 180 TSIVAFLAET GSPFMVNAYP YFAYRDNPDS VDLQYALLGN ATGVRDPAGY IYSNMLDAQI 240 DAVRSAVNSL GFGNQTIDIT VSESGWPSKG DPGDTAATPD IARTYNTRLI ERAQSNKGTP 300 MKPKDNIEIY VFALFNENKK GGDVSERNFG IFNGDGSKVY EVDLSCQFCS NGGTFEFGEK 360 VSSGARGPSV WCVAKPHADE KVLQAVLDFC CGPGGVDCRE IYESGDCFAP DKLHAHASYA 420 MNAYYQMHGR NYWNCDFKGT GLVTFSDPSY GKCRYPQQ |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0004 | 85 | 335 | 255 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-19 | 371 | 441 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-36 | 371 | 455 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-88 | 23 | 343 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40742.1 | 0 | 17 | 458 | 43 | 485 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_001761806.1 | 0 | 22 | 449 | 33 | 451 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002272900.1 | 0 | 17 | 458 | 18 | 460 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300634.1 | 0 | 15 | 344 | 12 | 341 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510704.1 | 0 | 1 | 458 | 1 | 458 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 23 | 344 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 23 | 344 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 0 | 23 | 344 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghr_A | 0 | 23 | 344 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aq0_B | 0 | 23 | 344 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |