Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30170.m014027 |
Family | CBM43 |
Protein Properties | Length: 461 Molecular Weight: 48863.3 Isoelectric Point: 4.7954 |
Chromosome | Chromosome/Scaffold: 30170 Start: 2396898 End: 2399043 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 373 | 454 | 1.2e-32 |
WCVPKEGVSDAQFQANLDYACGQGIDCSPIQPGGACFEPNTVASHAAYAMNLLYQTSEKNPSTCDFSQTAILSSENPSYNSC | |||
GH17 | 29 | 345 | 0 |
IGVNYGQVADNLPPPSATAKLLQSTSIQKVRLYGSDPAIIKALANTGIGITIGASSGDIPSLASDPNFAKNWVDTNVVPFYPASKIILITIGNEVMSSGD QNLMSNLLPAMQNVQNALNAASLGGEIKVSTVHSMAVLKQSEPPSTGSFDPSFGDLMKGLLAFNNATGSPFAINPYPYFAYRSDPRPETLAFCLFQPNAG RLDGNTKIKYMNMFDAQVDAVYSALNSMGFKNVEIVVAETGWPYKGDSNEVGPSLENAKAYIGNLIAHLRSMVGTPLMPGKSVDTYLFALYDEDLKPGPG SERAFGLFKPDLTMTFD |
Full Sequence |
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Protein Sequence Length: 461 Download |
MAVLLRSSVA FLLLSILQAV SIANSESFIG VNYGQVADNL PPPSATAKLL QSTSIQKVRL 60 YGSDPAIIKA LANTGIGITI GASSGDIPSL ASDPNFAKNW VDTNVVPFYP ASKIILITIG 120 NEVMSSGDQN LMSNLLPAMQ NVQNALNAAS LGGEIKVSTV HSMAVLKQSE PPSTGSFDPS 180 FGDLMKGLLA FNNATGSPFA INPYPYFAYR SDPRPETLAF CLFQPNAGRL DGNTKIKYMN 240 MFDAQVDAVY SALNSMGFKN VEIVVAETGW PYKGDSNEVG PSLENAKAYI GNLIAHLRSM 300 VGTPLMPGKS VDTYLFALYD EDLKPGPGSE RAFGLFKPDL TMTFDAGLSK TSQTPSTPKT 360 PVNSSPKPNK AAWCVPKEGV SDAQFQANLD YACGQGIDCS PIQPGGACFE PNTVASHAAY 420 AMNLLYQTSE KNPSTCDFSQ TAILSSENPS YNSCTYPGGS A |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 6.0e-8 | 15 | 339 | 334 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-22 | 373 | 443 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-38 | 373 | 456 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-89 | 29 | 341 | 314 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95331.1 | 0 | 11 | 461 | 6 | 456 | unknown [Populus trichocarpa] |
EMBL | CBI32582.1 | 0 | 24 | 458 | 54 | 489 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002282736.1 | 0 | 1 | 459 | 1 | 463 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002284340.1 | 0 | 24 | 458 | 54 | 489 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002510373.1 | 0 | 1 | 461 | 1 | 461 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 29 | 339 | 1 | 303 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 29 | 349 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 29 | 349 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 29 | 349 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 29 | 349 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |