Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30190.m010891 |
Family | CBM43 |
Protein Properties | Length: 460 Molecular Weight: 48827.3 Isoelectric Point: 4.9553 |
Chromosome | Chromosome/Scaffold: 30190 Start: 469850 End: 473651 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 372 | 453 | 1e-33 |
WCMPKSGVPDAQLQASLDYACGQGIDCSPIQPGGACFEPNTLASHAAYAMNLYYQTSSKNPWNCDFSQTATLTSKNPSYNGC | |||
GH17 | 28 | 344 | 0 |
IGINYGLVADNLPPPTASAKLLQSTAIQKVRLYGADPAVLKALANTGIGVVIGAANGDIPALASDPNSATQWINANVLPYYPATNIILITVGNEVVLSGD QNLISQLLPAMQNIANALNAASLGGKIKVSTVHSMAVLSQSDPPSSGLFNPSYQDTMKGLLQFQRDNGSPLTINPYPFFAYQSDPRPETLAFCLFQPNSG RIDSGNGIKYMNMFDAQVDAVRSALNGIGFKDIEILVAETGWPYRGDSNEVGPSVENARAYNGNLIAHLRSLVGTPLMPGKSVDTYLFALYDEDLKPGPS SERAFGLFKTDLSMAYD |
Full Sequence |
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Protein Sequence Length: 460 Download |
MAFSTLNFLF LCLLLLRDFY LSSSQSFIGI NYGLVADNLP PPTASAKLLQ STAIQKVRLY 60 GADPAVLKAL ANTGIGVVIG AANGDIPALA SDPNSATQWI NANVLPYYPA TNIILITVGN 120 EVVLSGDQNL ISQLLPAMQN IANALNAASL GGKIKVSTVH SMAVLSQSDP PSSGLFNPSY 180 QDTMKGLLQF QRDNGSPLTI NPYPFFAYQS DPRPETLAFC LFQPNSGRID SGNGIKYMNM 240 FDAQVDAVRS ALNGIGFKDI EILVAETGWP YRGDSNEVGP SVENARAYNG NLIAHLRSLV 300 GTPLMPGKSV DTYLFALYDE DLKPGPSSER AFGLFKTDLS MAYDAGLSKA SVTPSSPKTP 360 ATPSTKPTGA GWCMPKSGVP DAQLQASLDY ACGQGIDCSP IQPGGACFEP NTLASHAAYA 420 MNLYYQTSSK NPWNCDFSQT ATLTSKNPSY NGCVYPGGST |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-9 | 26 | 338 | 327 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-22 | 372 | 442 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-40 | 372 | 455 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-94 | 28 | 344 | 317 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95331.1 | 0 | 1 | 459 | 1 | 455 | unknown [Populus trichocarpa] |
GenBank | ABK95837.1 | 0 | 1 | 460 | 1 | 452 | unknown [Populus trichocarpa] |
EMBL | CBI32582.1 | 0 | 24 | 457 | 55 | 489 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002282736.1 | 0 | 4 | 460 | 7 | 465 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002509479.1 | 0 | 1 | 460 | 1 | 460 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 28 | 335 | 1 | 300 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 28 | 344 | 1 | 303 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 28 | 344 | 1 | 303 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 0 | 28 | 343 | 3 | 310 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 0 | 28 | 343 | 3 | 310 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |