Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma06g01500.3 |
Family | CBM43 |
Protein Properties | Length: 320 Molecular Weight: 34014 Isoelectric Point: 5.0269 |
Chromosome | Chromosome/Scaffold: 06 Start: 950475 End: 954085 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 231 | 312 | 1e-33 |
WCVAKAGVSDAQLQANIDYACSQGIDCGPIQPGGSCFEPNTIASHAAFAMNLYYQTSGKNQWNCDFSQSATLTSQNPSYNAC | |||
GH17 | 1 | 208 | 0 |
MRNVQNALGAASLGGKIRVSTVHSMAVLTQSDPPSSGLFNPALQDTLKQLLALLKDNKSPFTINPYPFFAYQSDPRSETLAFCLFQPNSGRVDSGNGKLY TNMFDAQVDAVHSALSAMGFQDVEIVVAETGWPSRGDSNEVGPSVENAKAYNGNLIAHLRSLVGTPLMPGKSVDTYIFALYDEDLKPGPGSERAFGMFKT DRTVLYDV |
Full Sequence |
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Protein Sequence Length: 320 Download |
MRNVQNALGA ASLGGKIRVS TVHSMAVLTQ SDPPSSGLFN PALQDTLKQL LALLKDNKSP 60 FTINPYPFFA YQSDPRSETL AFCLFQPNSG RVDSGNGKLY TNMFDAQVDA VHSALSAMGF 120 QDVEIVVAET GWPSRGDSNE VGPSVENAKA YNGNLIAHLR SLVGTPLMPG KSVDTYIFAL 180 YDEDLKPGPG SERAFGMFKT DRTVLYDVGL TKSSQQTPTT PVTPAPNTAG WCVAKAGVSD 240 AQLQANIDYA CSQGIDCGPI QPGGSCFEPN TIASHAAFAM NLYYQTSGKN QWNCDFSQSA 300 TLTSQNPSYN ACIYTGGST* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-7 | 123 | 202 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-24 | 231 | 301 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-41 | 231 | 314 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 8.0e-59 | 1 | 208 | 208 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95331.1 | 0 | 1 | 318 | 134 | 455 | unknown [Populus trichocarpa] |
GenBank | ABK95837.1 | 0 | 1 | 319 | 133 | 452 | unknown [Populus trichocarpa] |
EMBL | CAN61862.1 | 0 | 1 | 316 | 158 | 478 | hypothetical protein [Vitis vinifera] |
EMBL | CBI32582.1 | 0 | 1 | 316 | 169 | 489 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002509479.1 | 0 | 1 | 319 | 138 | 460 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 7.9874e-44 | 223 | 318 | 4 | 100 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3ur8_B | 2e-40 | 1 | 210 | 113 | 314 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3ur8_A | 2e-40 | 1 | 210 | 113 | 314 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3ur7_B | 2e-40 | 1 | 210 | 113 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 2e-40 | 1 | 210 | 113 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO781349 | 321 | 1 | 317 | 0 |
HO796302 | 321 | 1 | 317 | 0 |
DY293193 | 322 | 3 | 314 | 0 |
FY467371 | 285 | 1 | 283 | 0 |
FG987298 | 232 | 57 | 287 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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