Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma18g52860.1 |
Family | CBM43 |
Protein Properties | Length: 455 Molecular Weight: 49466.7 Isoelectric Point: 9.3376 |
Chromosome | Chromosome/Scaffold: 18 Start: 61306126 End: 61309923 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 371 | 453 | 4.2e-31 |
WCVPKADASNQALQANINYVCSQGVDCRPIQPGGDCFAANNVKALATYAMNAYYQANGRHDFNCDFSQTGVITTTNPSHDKCK | |||
GH17 | 25 | 336 | 0 |
IGINYGTLGDNLPPPAAVANFLKTKTTIDRVKIYDVNPDILRAFAGSGISVTVTAPNGDIAALTKIDSARQWVATHIKPFHPQTKINYILVGSEVLHWGD TNMIRGLVPAMRTLHSALLAEGITDIKVTTAHSLAIMRSSIPPSMGRFRPGYAKHVLGPMLKFLRETRTPLMVNPYPYFGYNGKNVNFLLFRPNRGLYDR YTKRSYTNQFDALMDAVHSAMNALGYGDVDIAVGETGWPSVCDGWDACSVANAQSFNRELVKHLATGKGTPLMPNRSFETYIFALFNENQKPGPIAERNW GLFQPDFTPVYD |
Full Sequence |
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Protein Sequence Length: 455 Download |
MATTSAFLLL PLLLLLHLAI AAHGIGINYG TLGDNLPPPA AVANFLKTKT TIDRVKIYDV 60 NPDILRAFAG SGISVTVTAP NGDIAALTKI DSARQWVATH IKPFHPQTKI NYILVGSEVL 120 HWGDTNMIRG LVPAMRTLHS ALLAEGITDI KVTTAHSLAI MRSSIPPSMG RFRPGYAKHV 180 LGPMLKFLRE TRTPLMVNPY PYFGYNGKNV NFLLFRPNRG LYDRYTKRSY TNQFDALMDA 240 VHSAMNALGY GDVDIAVGET GWPSVCDGWD ACSVANAQSF NRELVKHLAT GKGTPLMPNR 300 SFETYIFALF NENQKPGPIA ERNWGLFQPD FTPVYDSGIL RNGQAVTPAR PTPTRPAAPT 360 KPAPAVGGQK WCVPKADASN QALQANINYV CSQGVDCRPI QPGGDCFAAN NVKALATYAM 420 NAYYQANGRH DFNCDFSQTG VITTTNPSHD KCKI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-22 | 370 | 441 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-38 | 370 | 453 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 5.0e-95 | 25 | 336 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95730.1 | 0 | 9 | 453 | 13 | 446 | unknown [Populus trichocarpa] |
GenBank | ACM45718.1 | 0 | 23 | 453 | 21 | 451 | endo-1,3-beta-glucanase [Pyrus pyrifolia] |
EMBL | CAB85903.1 | 0 | 16 | 454 | 18 | 453 | beta-1,3 glucanase [Pisum sativum] |
RefSeq | XP_002283647.1 | 0 | 16 | 453 | 19 | 444 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002312097.1 | 0 | 9 | 453 | 13 | 446 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 25 | 330 | 2 | 306 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_C | 0 | 25 | 330 | 2 | 306 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_B | 0 | 25 | 330 | 2 | 306 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_A | 0 | 25 | 330 | 2 | 306 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3em5_D | 0 | 25 | 330 | 2 | 306 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |