Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10004962 |
Family | CBM43 |
Protein Properties | Length: 459 Molecular Weight: 50530.5 Isoelectric Point: 9.1663 |
Chromosome | Chromosome/Scaffold: 2786 Start: 77902 End: 80210 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 370 | 452 | 1.3e-33 |
WCVPRSDASDEALQRNLDYVCSSGVDCQPIQKGGACFNPNTVRSHASYAMNAYYQRSGRHDSDCDFGRTGFLTSDNPSYQACS | |||
GH17 | 26 | 341 | 0 |
IGVNYGTLANNLPPPSQVSSFLKSKTTIDRVKIFDANPDILRAFSDTGISVTITIANADVPSLSKLPAAQTWIQTNIHPFHPKTKIRYILIGNEVLYWKD RNVIAHTLPALKTVHRALQLANLTDVIKVTTPHAFSFLAASRPASTGRFRRFDAAILRPILDFHLRTRTPFMVNPYPFFSFGTADMLDYAVFRPNKGIYD RATGKWYTNLFDELMDAAYSAMKKLDARFGDVEIVIGETGWPSAGDPNQLGVGWENAVSYNGNLVKHLRSGRGTPLMPNRTFETYVFALFNENLKPSVSE QNYGLFRPDLTAVYDV |
Full Sequence |
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Protein Sequence Length: 459 Download |
MAISPILLLL SLQILLPPPP TAAYSIGVNY GTLANNLPPP SQVSSFLKSK TTIDRVKIFD 60 ANPDILRAFS DTGISVTITI ANADVPSLSK LPAAQTWIQT NIHPFHPKTK IRYILIGNEV 120 LYWKDRNVIA HTLPALKTVH RALQLANLTD VIKVTTPHAF SFLAASRPAS TGRFRRFDAA 180 ILRPILDFHL RTRTPFMVNP YPFFSFGTAD MLDYAVFRPN KGIYDRATGK WYTNLFDELM 240 DAAYSAMKKL DARFGDVEIV IGETGWPSAG DPNQLGVGWE NAVSYNGNLV KHLRSGRGTP 300 LMPNRTFETY VFALFNENLK PSVSEQNYGL FRPDLTAVYD VGILRSPQAQ SPPANGGRVP 360 AKSPPAGHKW CVPRSDASDE ALQRNLDYVC SSGVDCQPIQ KGGACFNPNT VRSHASYAMN 420 AYYQRSGRHD SDCDFGRTGF LTSDNPSYQA CSFASIES* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 4.0e-25 | 369 | 439 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-42 | 369 | 453 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-91 | 26 | 341 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI23036.1 | 0 | 2 | 453 | 4 | 458 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002283647.1 | 0 | 23 | 455 | 25 | 447 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002283660.1 | 0 | 23 | 455 | 25 | 406 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
RefSeq | XP_002298356.1 | 0 | 21 | 447 | 22 | 447 | glycoside hydrolase [Populus trichocarpa] |
RefSeq | XP_002532848.1 | 0 | 18 | 453 | 17 | 444 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 25 | 341 | 1 | 313 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3f55_C | 0 | 25 | 341 | 1 | 313 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3f55_B | 0 | 25 | 341 | 1 | 313 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3f55_A | 0 | 25 | 341 | 1 | 313 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3em5_D | 0 | 25 | 341 | 1 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |