Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr7g026340.1 |
Family | CBM43 |
Protein Properties | Length: 449 Molecular Weight: 49279.6 Isoelectric Point: 9.6419 |
Chromosome | Chromosome/Scaffold: 7 Start: 7259245 End: 7263054 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 365 | 446 | 6.2e-31 |
WCVPKPDASNAALQANINYVCSQKVDCRPIQPGGVCFAANNLRALATYAMNAYYQAMGRHPFNCDFSNSGVIVSTNPSHDNC | |||
GH17 | 23 | 334 | 0 |
IGVNYGTLADNLPPPATVANFLKTNTIVDRVKIFDVSPQILQAFANTGISVTVTAPNGDIAALGNINSARQWVQQKIKPFYPATKINYILVGSEVLHWGD GNMIRGLVPAMRTLHSALVAEGINDIKVTTAHSLIIMRQSLPPSAGKFRPGFAKHVIAPMLKFLRETRTPFMVNPYPYFGYNPKNVNFALFRPNRGLFDR NTRLTYTNQFDALMDAVYSAMKGLGFGDVDIAVGETGWPSVCDGWDACSVANAQSYNGELIRHLEAGRGTPLMPNRRFETFLFALFNENQKPGPIAERNW GLFRPDFSPVYD |
Full Sequence |
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Protein Sequence Length: 449 Download |
MTTKTTLLFL FLLHVSVTVV NSIGVNYGTL ADNLPPPATV ANFLKTNTIV DRVKIFDVSP 60 QILQAFANTG ISVTVTAPNG DIAALGNINS ARQWVQQKIK PFYPATKINY ILVGSEVLHW 120 GDGNMIRGLV PAMRTLHSAL VAEGINDIKV TTAHSLIIMR QSLPPSAGKF RPGFAKHVIA 180 PMLKFLRETR TPFMVNPYPY FGYNPKNVNF ALFRPNRGLF DRNTRLTYTN QFDALMDAVY 240 SAMKGLGFGD VDIAVGETGW PSVCDGWDAC SVANAQSYNG ELIRHLEAGR GTPLMPNRRF 300 ETFLFALFNE NQKPGPIAER NWGLFRPDFS PVYDSGILRN AQRPVAPVQP RPVTPVQPRP 360 AIGSWCVPKP DASNAALQAN INYVCSQKVD CRPIQPGGVC FAANNLRALA TYAMNAYYQA 420 MGRHPFNCDF SNSGVIVSTN PSHDNCRI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 5.0e-24 | 364 | 435 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 9.0e-39 | 364 | 447 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-94 | 23 | 334 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACM45718.1 | 0 | 22 | 447 | 22 | 451 | endo-1,3-beta-glucanase [Pyrus pyrifolia] |
EMBL | CAB85903.1 | 0 | 17 | 448 | 21 | 453 | beta-1,3 glucanase [Pisum sativum] |
RefSeq | XP_002283647.1 | 0 | 22 | 447 | 27 | 444 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002312098.1 | 0 | 18 | 448 | 25 | 453 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530863.1 | 0 | 1 | 447 | 1 | 455 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 23 | 334 | 1 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 23 | 334 | 1 | 303 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 23 | 334 | 1 | 303 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghr_A | 0 | 23 | 333 | 1 | 302 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1aq0_B | 0 | 23 | 333 | 1 | 302 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |