Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s1_72V6.2 |
Family | CBM43 |
Protein Properties | Length: 485 Molecular Weight: 51466 Isoelectric Point: 4.6675 |
Chromosome | Chromosome/Scaffold: 1 Start: 408591 End: 411543 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 361 | 444 | 3.7e-29 |
WCIAKQGMSEVVLQTALDFACGATGMVDCTPIQPNGTCFLPDTRYSHASWAMNMFYANSSDGAASCNFQGAGRITTSDPSYGSC | |||
GH17 | 26 | 344 | 0 |
VGFNYGTNGDNLPSPTQAVALLKSLGITQVRIYDTDPAVLDAFKDSNIQLVIGILNSELFQVGATNTSAAEWVTTKIAPYANSTDIYAIAVGNEVLTGYP NASSLLVPAMNNIYSALAASNLQNIKVSSPCSMDLLAASFFPSAGQFNGSHAEIPALLDFLSRTFSPYMVNVYPWKAFTAQPTVISLDYALSNMNGTNGT VVDPGSNSTYTSLFDAQLDAVYAALGRSNHSDLMVVVSETGWPTAGDTGEAGASIPNAQTYNSNLVKRVVNNVGTPARPGIVINAFLYELFNENQNVGPT SQRNFGVFTNDSTPLYALN |
Full Sequence |
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Protein Sequence Length: 485 Download |
MLRHGCLWPR VLIILVFYVT TSGAYVGFNY GTNGDNLPSP TQAVALLKSL GITQVRIYDT 60 DPAVLDAFKD SNIQLVIGIL NSELFQVGAT NTSAAEWVTT KIAPYANSTD IYAIAVGNEV 120 LTGYPNASSL LVPAMNNIYS ALAASNLQNI KVSSPCSMDL LAASFFPSAG QFNGSHAEIP 180 ALLDFLSRTF SPYMVNVYPW KAFTAQPTVI SLDYALSNMN GTNGTVVDPG SNSTYTSLFD 240 AQLDAVYAAL GRSNHSDLMV VVSETGWPTA GDTGEAGASI PNAQTYNSNL VKRVVNNVGT 300 PARPGIVINA FLYELFNENQ NVGPTSQRNF GVFTNDSTPL YALNLVGTNN TSGSGVGQRS 360 WCIAKQGMSE VVLQTALDFA CGATGMVDCT PIQPNGTCFL PDTRYSHASW AMNMFYANSS 420 DGAASCNFQG AGRITTSDPS YGSCVYPAST STTVSSDQKS KLVLSSAPLL CQLSFLLLAM 480 SLWR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-5 | 27 | 336 | 322 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 4.0e-15 | 360 | 432 | 82 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-32 | 360 | 446 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 3.0e-91 | 26 | 344 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001751439.1 | 0 | 23 | 440 | 1 | 418 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001767901.1 | 0 | 13 | 471 | 15 | 485 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001784088.1 | 0 | 24 | 483 | 7 | 462 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002278044.1 | 0 | 23 | 447 | 21 | 468 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002514201.1 | 0 | 11 | 446 | 11 | 451 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 345 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 26 | 345 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 26 | 345 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 26 | 345 | 2 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 26 | 345 | 2 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |