| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_007570m |
| Family | CBM43 |
| Protein Properties | Length: 449 Molecular Weight: 49148.2 Isoelectric Point: 9.085 |
| Chromosome | Chromosome/Scaffold: 08265 Start: 1936788 End: 1939118 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 364 | 446 | 3.6e-33 |
| WCVPKPEANDQQLQGNIDYVCSQGVDCKPIQAGGVCFDPNNVRSHASFVMNSFYQSQGQNAFNCDFSQTGVLTTANPSHGACK | |||
| GH17 | 26 | 339 | 0 |
| IGVNYGTLGNNLPPPSQVANFLKTQTIIDSIKIFDTNPDVLRAFANTNISVTVTVGNGDIPALSDERAARRWVADNIKPYYPRTKINRIAVGNEILMSAV QDWIAHLVPCMKALHHALVVAGINDVKVSTPHTLGILHNSVPPSAARIRPGYQKSIFAPMLAFLRETKSPLMVNPYPYFSYAPKVAKYILFQPNRGIHDR FTGITYSNMFDAMMDAVYSALKAMGYPDVDILVAETGWPSAGDPDQPACTVENAITYNGNLIKHVTSGKGTPLMPNRRFETYIFALFNENLKPGTSAERN WGLFRPDFSPVYDV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 449 Download |
| MTTTTLTTAL LLLSTLLRFS TTTLAIGVNY GTLGNNLPPP SQVANFLKTQ TIIDSIKIFD 60 TNPDVLRAFA NTNISVTVTV GNGDIPALSD ERAARRWVAD NIKPYYPRTK INRIAVGNEI 120 LMSAVQDWIA HLVPCMKALH HALVVAGIND VKVSTPHTLG ILHNSVPPSA ARIRPGYQKS 180 IFAPMLAFLR ETKSPLMVNP YPYFSYAPKV AKYILFQPNR GIHDRFTGIT YSNMFDAMMD 240 AVYSALKAMG YPDVDILVAE TGWPSAGDPD QPACTVENAI TYNGNLIKHV TSGKGTPLMP 300 NRRFETYIFA LFNENLKPGT SAERNWGLFR PDFSPVYDVG ILRNQKNNPA NPKPSPKPAP 360 GKKWCVPKPE ANDQQLQGNI DYVCSQGVDC KPIQAGGVCF DPNNVRSHAS FVMNSFYQSQ 420 GQNAFNCDFS QTGVLTTANP SHGACKYL* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.003 | 254 | 332 | 82 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 3.0e-25 | 364 | 434 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 6.0e-43 | 364 | 447 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-100 | 26 | 339 | 320 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95730.1 | 0 | 9 | 447 | 12 | 447 | unknown [Populus trichocarpa] |
| RefSeq | XP_002283647.1 | 0 | 9 | 448 | 2 | 446 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002312097.1 | 0 | 9 | 447 | 12 | 447 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530862.1 | 0 | 2 | 441 | 4 | 439 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| RefSeq | XP_002530863.1 | 0 | 1 | 448 | 1 | 457 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghs_B | 0 | 26 | 339 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 26 | 339 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 2cyg_A | 0 | 26 | 339 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 26 | 339 | 3 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 26 | 339 | 3 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
