Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_3.108 |
Family | CBM43 |
Protein Properties | Length: 461 Molecular Weight: 49529.5 Isoelectric Point: 6.0975 |
Chromosome | Chromosome/Scaffold: 3 Start: 866689 End: 868543 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 376 | 459 | 3.1e-30 |
WCLPKTGAETEALQRNIDYACGSGFADCGPIKSGGACFLPNTVRAHAAFAMNAYYQATGKNEYDCDFDQTGAITDVDPSYGKCK | |||
GH17 | 23 | 337 | 0 |
IGVNYGTVANNLPPPRKVANFLLESTIINRVRLFDANPEILEAFAHTGIAITVTVPNDQIPHLTKLSFAQQWLKTNIQPHVPSTNIVRILIGNEVLSTAN KMLIAGLVPAMQSLHTALVGASLDRRIKVSTPHSLGVLSTSSPPSTGKFRQGYDTHVLKPLLSFLRATDSPFLINPYPFFGCSADTLDFALFRPNSGVFD ENTKLLYTNMLDAQLDAVFSAMKLLGFNDVEIVIAETGWPSMGDSAQVGVDANSAAEYNSNLMRHVNSGAGTPLMPNRTFETYIFALFNENLKPGPACER NFGLFEPDMTPVYNV |
Full Sequence |
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Protein Sequence Length: 461 Download |
MLNTLLLIIV SSLLISLGTE GAIGVNYGTV ANNLPPPRKV ANFLLESTII NRVRLFDANP 60 EILEAFAHTG IAITVTVPND QIPHLTKLSF AQQWLKTNIQ PHVPSTNIVR ILIGNEVLST 120 ANKMLIAGLV PAMQSLHTAL VGASLDRRIK VSTPHSLGVL STSSPPSTGK FRQGYDTHVL 180 KPLLSFLRAT DSPFLINPYP FFGCSADTLD FALFRPNSGV FDENTKLLYT NMLDAQLDAV 240 FSAMKLLGFN DVEIVIAETG WPSMGDSAQV GVDANSAAEY NSNLMRHVNS GAGTPLMPNR 300 TFETYIFALF NENLKPGPAC ERNFGLFEPD MTPVYNVGIL RSTARSTFPR NPSPTVPVPA 360 ASAPSPSPPT EGSGLWCLPK TGAETEALQR NIDYACGSGF ADCGPIKSGG ACFLPNTVRA 420 HAAFAMNAYY QATGKNEYDC DFDQTGAITD VDPSYGKCKY * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-19 | 375 | 446 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 9.0e-38 | 375 | 460 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 6.0e-96 | 23 | 337 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI23036.1 | 0 | 7 | 460 | 8 | 458 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002271991.1 | 0 | 7 | 457 | 8 | 476 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318439.1 | 0 | 1 | 460 | 12 | 463 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321390.1 | 0 | 22 | 454 | 1 | 419 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526252.1 | 0 | 4 | 454 | 14 | 466 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 23 | 337 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 23 | 337 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 23 | 337 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 0 | 23 | 337 | 3 | 312 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 0 | 23 | 337 | 3 | 312 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY278014 | 333 | 18 | 350 | 0 |
FC903920 | 280 | 18 | 297 | 0 |
EG484762 | 296 | 20 | 315 | 0 |
EG486112 | 299 | 49 | 347 | 0 |
EG486110 | 291 | 49 | 339 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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