Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_36.69 |
Family | CBM43 |
Protein Properties | Length: 466 Molecular Weight: 49487.2 Isoelectric Point: 5.6751 |
Chromosome | Chromosome/Scaffold: 36 Start: 527314 End: 529495 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 377 | 459 | 5.4e-32 |
WCVPKADVSNAQLQANLDYVCGRGLDCSPIQPGGACFEPNTIASHAAFAMNLLYQTAGRNPWDCDFSQTATLSSNNPSYDGCS | |||
GH17 | 30 | 347 | 0 |
IGVNYGQVADNLPPTSATVKLLQSTTIQKVRLYGSDPAVIKALANTGIGIVIGAANGAIPALASDLNFAKNWVNTNVAPFYPASKIILITVGNEVMTSGD QNLMNQLLPAMQNMQNALDSVSLGGKIKVSTVHSMAVLKQSEPPSSGSFDPSFADVMKGLLGFNKNTGSPFAINPYPYFAYRSDPRPETLAFCLFQPNAG RFDSNTKINYMNMFDAQVDAVHSALSSMGFKDVEIVVAETGWPYKGDSNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKPVDTYLFALYDEDLKPGPT SERAFGLFKPDLTMTYDV |
Full Sequence |
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Protein Sequence Length: 466 Download |
MAVLPYNAVF LLFILTALHA VNLANSQSFI GVNYGQVADN LPPTSATVKL LQSTTIQKVR 60 LYGSDPAVIK ALANTGIGIV IGAANGAIPA LASDLNFAKN WVNTNVAPFY PASKIILITV 120 GNEVMTSGDQ NLMNQLLPAM QNMQNALDSV SLGGKIKVST VHSMAVLKQS EPPSSGSFDP 180 SFADVMKGLL GFNKNTGSPF AINPYPYFAY RSDPRPETLA FCLFQPNAGR FDSNTKINYM 240 NMFDAQVDAV HSALSSMGFK DVEIVVAETG WPYKGDSNEV GPSVENAKAY NGNLIAHLRS 300 MAGTPLMPGK PVDTYLFALY DEDLKPGPTS ERAFGLFKPD LTMTYDVGLM TKGGSSQTPA 360 SPKAPTNPSP SPKNPVWCVP KADVSNAQLQ ANLDYVCGRG LDCSPIQPGG ACFEPNTIAS 420 HAAFAMNLLY QTAGRNPWDC DFSQTATLSS NNPSYDGCSY PAGST* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-6 | 231 | 340 | 114 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 4.0e-22 | 377 | 447 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-38 | 377 | 460 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-90 | 30 | 347 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95331.1 | 0 | 8 | 464 | 2 | 455 | unknown [Populus trichocarpa] |
EMBL | CBI32582.1 | 0 | 25 | 461 | 54 | 488 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002282736.1 | 0 | 13 | 465 | 11 | 465 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002284340.1 | 0 | 25 | 461 | 54 | 488 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002510373.1 | 0 | 1 | 464 | 1 | 460 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 30 | 347 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 30 | 347 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 0 | 30 | 347 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 30 | 349 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 30 | 349 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO782823 | 442 | 37 | 466 | 0 |
HO781349 | 415 | 50 | 463 | 0 |
HO796302 | 422 | 43 | 463 | 0 |
DY293193 | 326 | 142 | 461 | 0 |
DT751851 | 312 | 12 | 323 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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