Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna14081.1-v1.0-hybrid |
Family | CBM43 |
Protein Properties | Length: 516 Molecular Weight: 54846.4 Isoelectric Point: 7.162 |
Chromosome | Chromosome/Scaffold: 3 Start: 26612339 End: 26614239 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 385 | 466 | 8.3e-34 |
WCVPKSNVSDAALQKNIDYVCSSGVDCKPIKQGGPCFEPNSVKSHAAYVMNAYYQEHGPQNINCDFNGTGVVTSTDPSYKTC | |||
GH17 | 24 | 337 | 0 |
IGVNYGTVANNLPPPSQVATFLKTKTTIDRVKIFNTDPAVLRAFANTGIAVTVTVGNGNVPPLAKLPAAQSWVADNILPFYPRTNINRIAVGNEILATSD KDLIAHLLPAMKALHSALNLANVTSIQVSTPHSLGILAPNTGPPSLGQFRSGYDKVIFQPILEYHRQTKSPFLVNPYPFFGLSPDTLNYATFRPNAGVFD PATGVNYTNMFDAQMDAVFSAMKKVGYEDVDLVVAETGWPSAGDPNQLGVSVENAEAYNGNLIRHVSSGKGTPLMPNRTFETYIFALFNENLKPTLSEQN YGLFKPDLDPVYDV |
Full Sequence |
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Protein Sequence Length: 516 Download |
MDPNKLLLLC FLLSAFHVIL TSAIGVNYGT VANNLPPPSQ VATFLKTKTT IDRVKIFNTD 60 PAVLRAFANT GIAVTVTVGN GNVPPLAKLP AAQSWVADNI LPFYPRTNIN RIAVGNEILA 120 TSDKDLIAHL LPAMKALHSA LNLANVTSIQ VSTPHSLGIL APNTGPPSLG QFRSGYDKVI 180 FQPILEYHRQ TKSPFLVNPY PFFGLSPDTL NYATFRPNAG VFDPATGVNY TNMFDAQMDA 240 VFSAMKKVGY EDVDLVVAET GWPSAGDPNQ LGVSVENAEA YNGNLIRHVS SGKGTPLMPN 300 RTFETYIFAL FNENLKPTLS EQNYGLFKPD LDPVYDVGLL RNGQAEGPTS GPALSPASGP 360 AAGPEAMGPA PDVVAQSPAA AGKSWCVPKS NVSDAALQKN IDYVCSSGVD CKPIKQGGPC 420 FEPNSVKSHA AYVMNAYYQE HGPQNINCDF NGTGVVTSTD PSYKTCTYPT KVAEKEEKSP 480 GSSPAKSVAG SSTRMRCSKV ALFSLMVGCG VMFNI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-24 | 384 | 455 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-40 | 384 | 468 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 3.0e-91 | 24 | 337 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 24 | 339 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 24 | 337 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 24 | 337 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 24 | 339 | 2 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 24 | 339 | 2 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |