Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna15136.1-v1.0-hybrid |
Family | CBM43 |
Protein Properties | Length: 487 Molecular Weight: 51414.1 Isoelectric Point: 5.6056 |
Chromosome | Chromosome/Scaffold: 2 Start: 22279502 End: 22281341 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 392 | 474 | 1.3e-30 |
WCLPKKGASETQLQANIDYVCGHGFDCSPIQPGGACFEPNNVASHAAYAMNILYQTAGHDAQNCDFSQTATLSSNNPSYDSCN | |||
GH17 | 26 | 343 | 0 |
IGVNYGQVADNLPPPSSTAKLLQSTTIQKVRLYGSDPAIIKALANTGIGIVIGAANGDVPALASDPNYAINWVSTNVVPFYPASNIILITVGNEVLTSGD HGLLTQLVPAMQNVQNALNSVSLGGKIKVSTVHAMSVLKQSEPPSSGSFDPGFGDVMKALLGFCSATGSPFAINPYPYFAYRDDPRPETLAFCLFQPNEG RFDSNTNIKYMNMFDAQVDAIKSALNSMGHGDVEIVVAETGWPYKGDDNEVGPSVQNAKAYNGNLIAHLRSMVGTPLMPGKSVDTYFFALYDENLKPGPG SERAFGLFKPDLTMTYDV |
Full Sequence |
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Protein Sequence Length: 487 Download |
MAIIILLRIV AFFVMAFNVA NCQSFIGVNY GQVADNLPPP SSTAKLLQST TIQKVRLYGS 60 DPAIIKALAN TGIGIVIGAA NGDVPALASD PNYAINWVST NVVPFYPASN IILITVGNEV 120 LTSGDHGLLT QLVPAMQNVQ NALNSVSLGG KIKVSTVHAM SVLKQSEPPS SGSFDPGFGD 180 VMKALLGFCS ATGSPFAINP YPYFAYRDDP RPETLAFCLF QPNEGRFDSN TNIKYMNMFD 240 AQVDAIKSAL NSMGHGDVEI VVAETGWPYK GDDNEVGPSV QNAKAYNGNL IAHLRSMVGT 300 PLMPGKSVDT YFFALYDENL KPGPGSERAF GLFKPDLTMT YDVGLAKSAS QTPTTPTMPA 360 TPTVPTTPKT PSTGPKTPAN PSAAPKPNKG VWCLPKKGAS ETQLQANIDY VCGHGFDCSP 420 IQPGGACFEP NNVASHAAYA MNILYQTAGH DAQNCDFSQT ATLSSNNPSY DSCNYPSGSY 480 PSGSTC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-9 | 24 | 336 | 326 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 6.0e-20 | 392 | 462 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 9.0e-37 | 392 | 475 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-96 | 26 | 343 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 345 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 26 | 343 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 26 | 343 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 0 | 26 | 345 | 3 | 314 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 0 | 26 | 345 | 3 | 314 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |