Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna26603.1-v1.0-hybrid |
Family | CBM43 |
Protein Properties | Length: 449 Molecular Weight: 49030 Isoelectric Point: 8.5888 |
Chromosome | Chromosome/Scaffold: 7 Start: 15681458 End: 15682982 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 363 | 444 | 3.9e-32 |
WCIAKPGATNQALQANLDYACSQPGVDCKPIQPNGPCFSTDIRSQASYAMNAYFQKNGRNNLSCDFSQTGVVTSTNPSHGEC | |||
GH17 | 21 | 329 | 0 |
IGVNYGTLGDNLPPPSQVANFLKTQTIIDSLKIFDMNPDIIRAFANSGISLTITLPNGDIPTLTNPRAARRWIQQNIKPFYPATLIRYICVGTEVLHWGD DAQKSNLVAAMRTLNNALRVEGFKGIKVSTPHSLGIMLTSEPPSQGRFRPEVTPILIQMLRFLRESNSPLMVNPYPYFGWSPENENYALFRQSRIDPITK LTYTSMFDGLLDAVYSAAKALGFPDVNILVGETGWPSACEFPVCSMQHAADYNGNLVKHVESGKGTPLMPNRKFETYIFSMFNENQKPGPLAEKNWGLFY PNLAPVYNV |
Full Sequence |
---|
Protein Sequence Length: 449 Download |
MATKFLLTLL LFHLSTTAYS IGVNYGTLGD NLPPPSQVAN FLKTQTIIDS LKIFDMNPDI 60 IRAFANSGIS LTITLPNGDI PTLTNPRAAR RWIQQNIKPF YPATLIRYIC VGTEVLHWGD 120 DAQKSNLVAA MRTLNNALRV EGFKGIKVST PHSLGIMLTS EPPSQGRFRP EVTPILIQML 180 RFLRESNSPL MVNPYPYFGW SPENENYALF RQSRIDPITK LTYTSMFDGL LDAVYSAAKA 240 LGFPDVNILV GETGWPSACE FPVCSMQHAA DYNGNLVKHV ESGKGTPLMP NRKFETYIFS 300 MFNENQKPGP LAEKNWGLFY PNLAPVYNVG IMRNQQGGGG SIPNPTPAKP APTTPPGNGG 360 KVWCIAKPGA TNQALQANLD YACSQPGVDC KPIQPNGPCF STDIRSQASY AMNAYFQKNG 420 RNNLSCDFSQ TGVVTSTNPS HGECTFAG* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.002 | 93 | 322 | 237 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 9.0e-24 | 363 | 433 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-38 | 363 | 446 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 5.0e-98 | 21 | 329 | 315 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 21 | 329 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 21 | 329 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 21 | 329 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 21 | 329 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 21 | 329 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |