Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna30558.1-v1.0-hybrid |
Family | CBM43 |
Protein Properties | Length: 226 Molecular Weight: 24250.8 Isoelectric Point: 4.0948 |
Chromosome | Chromosome/Scaffold: 3 Start: 1559626 End: 1561004 |
Description | glycosyl hydrolase family 17 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 40 | 123 | 1.2e-30 |
WCIAKPSTSKEALQNNLEYACSNINAMDCTAIQEGGPCSEPNDLLLYASFAMNAYYQAKGRHYWNCDFSNSGLISLTDPSYGSC | |||
CBM43 | 140 | 221 | 4e-32 |
WCVASPSASDDQIQANIDFACDKVDCSIISSGGACYEPNTVKNRASVAMNLYYQQTGQADTSCDFNGSGNIIRTDPSYGDCK |
Full Sequence |
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Protein Sequence Length: 226 Download |
MAKLALSSSI LPVLLLFFIS DSNNLAGQAE ASTVEWVKTW CIAKPSTSKE ALQNNLEYAC 60 SNINAMDCTA IQEGGPCSEP NDLLLYASFA MNAYYQAKGR HYWNCDFSNS GLISLTDPSY 120 GSCTYEGGET AVDDSNSGKW CVASPSASDD QIQANIDFAC DKVDCSIISS GGACYEPNTV 180 KNRASVAMNL YYQQTGQADT SCDFNGSGNI IRTDPSYGDC KFKYS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-15 | 39 | 111 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
pfam07983 | X8 | 2.0e-19 | 139 | 208 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-31 | 39 | 125 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
smart00768 | X8 | 1.0e-33 | 139 | 222 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 1e-25 | 137 | 223 | 10 | 97 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 2jon_A | 2e-24 | 33 | 128 | 6 | 99 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |