Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna30559.1-v1.0-hybrid |
Family | CBM43 |
Protein Properties | Length: 304 Molecular Weight: 32452.2 Isoelectric Point: 4.8529 |
Chromosome | Chromosome/Scaffold: 3 Start: 1562161 End: 1564231 |
Description | glycosyl hydrolase family 17 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 43 | 118 | 4e-23 |
WCVPNPSLSYETLQDITTYACNYVDCSAIYSGGPCFDPSNDLSHAAFAMNAYYQEQHDCFGGSGLIAITDPSYGNC | |||
CBM43 | 136 | 216 | 1.9e-27 |
WCVAKPTVADSLLQLNIDFACSRVNCSVIEPGGECQLPDTIMKHTSVAMNLYYQSFGRTDLSCYFQSTGMVVIEDPSSGTC |
Full Sequence |
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Protein Sequence Length: 304 Download |
MAAVLPALLV AAFLALSNLE LRAIAHSPGH SHAAFTADFA KTWCVPNPSL SYETLQDITT 60 YACNYVDCSA IYSGGPCFDP SNDLSHAAFA MNAYYQEQHD CFGGSGLIAI TDPSYGNCYF 120 VGREEMVSST AAPNTWCVAK PTVADSLLQL NIDFACSRVN CSVIEPGGEC QLPDTIMKHT 180 SVAMNLYYQS FGRTDLSCYF QSTGMVVIED PSSGTCVYER VVLVADAVPA SIKIKKGESG 240 AFSATSIGLM VVWSITGCGL MAVAVYVMLW LRKTRSPVVG VPVHTLPEPL YSRPEPSAPP 300 LPV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-13 | 42 | 106 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
pfam07983 | X8 | 7.0e-14 | 135 | 205 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-25 | 42 | 120 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
smart00768 | X8 | 4.0e-31 | 135 | 218 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 5e-19 | 132 | 218 | 9 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 2jon_A | 0.000000000001 | 36 | 120 | 6 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |