| Basic Information | |
|---|---|
| Species | Volvox carteri |
| Cazyme ID | Vocar20010278m |
| Family | GT5 |
| Protein Properties | Length: 661 Molecular Weight: 72547.9 Isoelectric Point: 9.3988 |
| Chromosome | Chromosome/Scaffold: 41 Start: 96470 End: 106210 |
| Description | starch synthase 4 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 157 | 458 | 0 |
| HVVHITAEMAPIAKVGGLGDVVTGLAKAAQARGHQVCVMLPFYECLPEEEIKGLKHEMDVEWGEKLRGRDDGHQSSPRGSGMASVRRRGWRRRRQPPAWR GGRKKSRGKGGPLRTSVYWGLVQGCAVYLLRPADGTNCNLFRGGRIYGGSYNEMEAYLYFCRACLEYLRASNQHPNILQLHDWHAAAAAMLYWEVYNNGA SYSRTRIVLTIHNMDNTGIRRKGVRKIVRECRQDEFSFTGVAGELFASIDKALDERTIGHNPERLNLMKGGIVYSNAVTTVSPTYALEVLNGGAAGWLRS TF | |||
| GT5 | 463 | 655 | 0 |
| GLGLAVSPRKPLVVVVSRLVPQKGIHLIKAAIFRTLERGGQFVLLGSGHSDPVFRSLAEGQFKNHPDCRLMIMYSERLAHQIYAAADVVVVPSMFEPCGL TQMIALRYGAVPVVRRTGGLADTVFDVDGPAAAGPRNGYTFDGTDEGSMYGALDRALQLYEQQPGRWAALSCDNMRLDVSWAKSAESYVDVYR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 661 Download |
| MASIRQFVGS RTLVHGPRPG ACVHNRVVVS TIQRTVCRVA KVEGDVTVEE ELLRLRRENE 60 LLRQQLALYQ QAAAPISIDT PESAVKSQAP TPAAARVETL ERPTATKQAA GPEAGILWPQ 120 ASGGEKFWER APRTAPAPLD RGAVQEPPVE RDANTLHVVH ITAEMAPIAK VGGLGDVVTG 180 LAKAAQARGH QVCVMLPFYE CLPEEEIKGL KHEMDVEWGE KLRGRDDGHQ SSPRGSGMAS 240 VRRRGWRRRR QPPAWRGGRK KSRGKGGPLR TSVYWGLVQG CAVYLLRPAD GTNCNLFRGG 300 RIYGGSYNEM EAYLYFCRAC LEYLRASNQH PNILQLHDWH AAAAAMLYWE VYNNGASYSR 360 TRIVLTIHNM DNTGIRRKGV RKIVRECRQD EFSFTGVAGE LFASIDKALD ERTIGHNPER 420 LNLMKGGIVY SNAVTTVSPT YALEVLNGGA AGWLRSTFAR PEGLGLAVSP RKPLVVVVSR 480 LVPQKGIHLI KAAIFRTLER GGQFVLLGSG HSDPVFRSLA EGQFKNHPDC RLMIMYSERL 540 AHQIYAAADV VVVPSMFEPC GLTQMIALRY GAVPVVRRTG GLADTVFDVD GPAAAGPRNG 600 YTFDGTDEGS MYGALDRALQ LYEQQPGRWA ALSCDNMRLD VSWAKSAESY VDVYRSVAAE 660 * 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02316 | PLN02316 | 2.0e-94 | 138 | 656 | 568 | + synthase/transferase | ||
| PLN02939 | PLN02939 | 1.0e-118 | 125 | 658 | 594 | + transferase, transferring glycosyl groups | ||
| PRK00654 | glgA | 4.0e-128 | 156 | 659 | 553 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 1.0e-145 | 157 | 656 | 552 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 4.0e-156 | 156 | 657 | 552 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACL36485.1 | 0 | 113 | 657 | 116 | 652 | starch synthase VI precursor [Picea glauca] |
| GenBank | EEH51281.1 | 0 | 165 | 659 | 1 | 496 | glycosyltransferase family 5 protein [Micromonas pusilla CCMP1545] |
| RefSeq | XP_001415787.1 | 0 | 118 | 657 | 26 | 567 | predicted protein [Ostreococcus lucimarinus CCE9901] |
| RefSeq | XP_001701469.1 | 0 | 97 | 659 | 92 | 651 | soluble starch synthase [Chlamydomonas reinhardtii] |
| RefSeq | XP_002500693.1 | 0 | 113 | 658 | 30 | 570 | glycosyltransferase family 5 protein [Micromonas sp. RCC299] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3guh_A | 8e-40 | 331 | 660 | 130 | 479 | A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase |
| PDB | 2r4u_A | 8e-40 | 331 | 660 | 130 | 479 | A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase |
| PDB | 2r4t_A | 8e-40 | 331 | 660 | 130 | 479 | A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FD880186 | 231 | 436 | 620 | 0 |
| BI997899 | 226 | 390 | 569 | 0 |
| BI722913 | 225 | 390 | 568 | 0 |
| BI719688 | 186 | 278 | 462 | 0 |
| BI716761 | 235 | 314 | 501 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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