y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma13g28630.1 |
Family | GH14 |
Protein Properties | Length: 537 Molecular Weight: 58781.3 Isoelectric Point: 5.8652 |
Chromosome | Chromosome/Scaffold: 13 Start: 31636922 End: 31639822 |
Description | beta-amylase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 87 | 492 | 0 |
FVGLPLDAVSYDCKSINHARAIAAGLKALKLLGVEGVELPIWWGIVEKDAMGQYDWSGYLAIAEMVQKVGLKLHVSLCFHGSKKPNIPLPKWVSQIGESQ PSIFFTDKSGQHYKECLSLAVDNLPVLDGKTPVQVYQSFCESFKSSFSPFMGSTIMSISMGLGPDGELRYPSHPQLPSNGKTQGAGEFQCYDQNMLSFLK QHAEASGNPLWGLGGPHDAPTYDQPPYNGFFNDGASWESTYGDFFLSWYSNQLIAHGDCLLSLASSTFGDSGVTIYGKLPLMHSWYGTRSHPSELTAGFY NTANRDGYEPVAQMFARNSCKIILPGMDLSDANQPEENHSSPELLLAQVMAACKKYEVKVSGQNSSESGVPGGFEQIKKNLSGDNVLDLFTYHRMGASFF SPEHFP |
Full Sequence |
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Protein Sequence Length: 537 Download |
MEVSVIGSSQ AKLGASELAS REVGFCNLKN NLRVLNDRVS FGRNNIRWEK AGISFTLRAL 60 QTEPVREEKK PSGIGTRSKT VDGVRLFVGL PLDAVSYDCK SINHARAIAA GLKALKLLGV 120 EGVELPIWWG IVEKDAMGQY DWSGYLAIAE MVQKVGLKLH VSLCFHGSKK PNIPLPKWVS 180 QIGESQPSIF FTDKSGQHYK ECLSLAVDNL PVLDGKTPVQ VYQSFCESFK SSFSPFMGST 240 IMSISMGLGP DGELRYPSHP QLPSNGKTQG AGEFQCYDQN MLSFLKQHAE ASGNPLWGLG 300 GPHDAPTYDQ PPYNGFFNDG ASWESTYGDF FLSWYSNQLI AHGDCLLSLA SSTFGDSGVT 360 IYGKLPLMHS WYGTRSHPSE LTAGFYNTAN RDGYEPVAQM FARNSCKIIL PGMDLSDANQ 420 PEENHSSPEL LLAQVMAACK KYEVKVSGQN SSESGVPGGF EQIKKNLSGD NVLDLFTYHR 480 MGASFFSPEH FPLFTEFVRS LKQPELHSDD LPAKEEEGAE SAMDMSHESS VSMQAA* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 5.0e-89 | 84 | 501 | 433 | + beta-amylase | ||
PLN02801 | PLN02801 | 1.0e-100 | 84 | 509 | 447 | + beta-amylase | ||
PLN02161 | PLN02161 | 1.0e-102 | 84 | 501 | 436 | + beta-amylase | ||
PLN00197 | PLN00197 | 2.0e-113 | 50 | 503 | 475 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 3.0e-126 | 66 | 503 | 449 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD38148.1 | 0 | 85 | 536 | 1 | 450 | AF139501_1 beta-amylase [Prunus armeniaca] |
EMBL | CAI39245.1 | 0 | 1 | 536 | 1 | 536 | beta-amylase [Glycine max] |
EMBL | CAN66037.1 | 0 | 1 | 536 | 1 | 541 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002276777.1 | 0 | 1 | 536 | 1 | 541 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002516865.1 | 0 | 1 | 536 | 1 | 545 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1fa2_A | 0 | 84 | 513 | 13 | 450 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
PDB | 1v3i_A | 0 | 84 | 501 | 12 | 441 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
PDB | 1q6g_A | 0 | 84 | 501 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
PDB | 1q6d_A | 0 | 84 | 501 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
PDB | 1wds_A | 0 | 84 | 501 | 12 | 441 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO781436 | 406 | 133 | 537 | 0 |
HO796964 | 391 | 148 | 537 | 0 |
FY469673 | 294 | 139 | 431 | 0 |
CA801449 | 252 | 137 | 388 | 0 |
HO781436 | 119 | 21 | 139 | 1.99965e-42 |
Sequence Alignments (This image is cropped. Click for full image.) |
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