| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra036467 |
| Family | GT47 |
| Protein Properties | Length: 586 Molecular Weight: 67058.2 Isoelectric Point: 6.3442 |
| Chromosome | Chromosome/Scaffold: 07 Start: 209637 End: 211394 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 118 | 457 | 0 |
| GKYIYVHDLPAKFNEDMLRDCKKLSLWTNMCKFTTNAGLGPPLENVEGVFSDQGWYATNQFAVDVIFSNRMKQYKCLTNDSSLAAAIFVPFYAGFDVARY LWGYNISTRDAASLELVDWLMKRPEWEIMRGKDHFLVAGRITWDFRRLSEEETDWGNKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPAKDSEVF EWQERMRNLDRKWLFSFAGAPRPDNPKSIRGQIIDQCRNSKVGKLLECDFGESKCHAPSSIMQMFQGSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPG SAYTQYTWHLPKNYTTYSVFIPEDDIRKRNMSIEERLLQI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 586 Download |
| MTPRVAMRRR SAEAAPAEPT EKGNDGKNQN NRIYLLVSLS LLFWALLFYF HFAEKQIQLQ 60 PQPQPSSSIS LRVDKFPLDP PKEKEPLVTT LPPIVEKQEF PFVRALKTAD NKSDPCGGKY 120 IYVHDLPAKF NEDMLRDCKK LSLWTNMCKF TTNAGLGPPL ENVEGVFSDQ GWYATNQFAV 180 DVIFSNRMKQ YKCLTNDSSL AAAIFVPFYA GFDVARYLWG YNISTRDAAS LELVDWLMKR 240 PEWEIMRGKD HFLVAGRITW DFRRLSEEET DWGNKLLFLP AAKNMSMLVV ESSPWNANDF 300 GIPYPTYFHP AKDSEVFEWQ ERMRNLDRKW LFSFAGAPRP DNPKSIRGQI IDQCRNSKVG 360 KLLECDFGES KCHAPSSIMQ MFQGSLFCLQ PQGDSYTRRS AFDSMLAGCI PVFFHPGSAY 420 TQYTWHLPKN YTTYSVFIPE DDIRKRNMSI EERLLQIPPE QVKIMRENVI NLIPGLIYAD 480 PRSELETLKD AFDVSVEAII DKVTRLRKNM IEGRTEYDNF VEENSWKYAL LEEGQREAGG 540 HVWDPFFSKP KPGEDSSGES NGGGTTITAD AAKNSWKSEQ RDKTQ* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 4.0e-71 | 115 | 457 | 358 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD21751.1 | 0 | 21 | 585 | 2 | 600 | unknown protein [Arabidopsis thaliana] |
| DDBJ | BAE98519.1 | 0 | 1 | 585 | 1 | 619 | hypothetical protein [Arabidopsis thaliana] |
| DDBJ | BAH19963.1 | 0 | 115 | 585 | 1 | 470 | AT2G20370 [Arabidopsis thaliana] |
| RefSeq | NP_179627.2 | 0 | 1 | 585 | 1 | 619 | MUR3 (MURUS 3); catalytic/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002301846.1 | 0 | 65 | 584 | 75 | 585 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |
