Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_76602g0010 |
Family | GT47 |
Protein Properties | Length: 455 Molecular Weight: 52175.9 Isoelectric Point: 9.6388 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 250 | 389 | 2.4e-34 |
PNSQRELKEWSETVASAQRDFLFAFVGAGRRGPGIRSAVIEQCRKSSSNCVMVNCTKTKCSHRPEAVMKELLKADFCLQPPGDSPTRRSTFDGLIAGCIP VFFRKDSAYEQYTWHLPSDPETYSVFISEKRMVSRKKTLR | |||
GT47 | 1 | 245 | 6.5e-38 |
MYNLPAKFNTQLLNNCSGKLVSWLDFCRHIDNRGFGAPIPNRTGWYATDLYMLEVVFHSRMKRYRCLVSDPGKADAFFIPYYIGLDALRFLYGSERDRAT YHGAELVSWLEKKAKWTWKKRGGIDHFMVTGRTVWDLSRAPTATGDYWGTSLLELPAMTNVTALLVESRPWMDREQAIPYLTSFHPNSQRELKEWSETVA SAQRDFLFAFVGAGRRGPGIRSAVIEQCRKSSSNCVMVNCTKTKC |
Full Sequence |
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Protein Sequence Length: 455 Download |
MYNLPAKFNT QLLNNCSGKL VSWLDFCRHI DNRGFGAPIP NRTGWYATDL YMLEVVFHSR 60 MKRYRCLVSD PGKADAFFIP YYIGLDALRF LYGSERDRAT YHGAELVSWL EKKAKWTWKK 120 RGGIDHFMVT GRTVWDLSRA PTATGDYWGT SLLELPAMTN VTALLVESRP WMDREQAIPY 180 LTSFHPNSQR ELKEWSETVA SAQRDFLFAF VGAGRRGPGI RSAVIEQCRK SSSNCVMVNC 240 TKTKCSSFHP NSQRELKEWS ETVASAQRDF LFAFVGAGRR GPGIRSAVIE QCRKSSSNCV 300 MVNCTKTKCS HRPEAVMKEL LKADFCLQPP GDSPTRRSTF DGLIAGCIPV FFRKDSAYEQ 360 YTWHLPSDPE TYSVFISEKR MVSRKKTLRI EDVLNSYSQE KIKRMREKII EIMPSLLYMN 420 FAAQGGGKDF PKDAFDISVE GMLNRVMSYR FWNRM |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 8.0e-26 | 246 | 389 | 154 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
pfam03016 | Exostosin | 3.0e-28 | 1 | 244 | 257 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK23792.1 | 0 | 301 | 455 | 1 | 155 | unknown [Picea sitchensis] |
RefSeq | NP_001150032.1 | 0 | 1 | 450 | 65 | 454 | xyloglucan galactosyltransferase KATAMARI 1 [Zea mays] |
RefSeq | XP_002329867.1 | 0 | 3 | 448 | 42 | 430 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002464524.1 | 0 | 1 | 450 | 94 | 482 | hypothetical protein SORBIDRAFT_01g020080 [Sorghum bicolor] |
RefSeq | XP_002529790.1 | 0 | 4 | 448 | 47 | 447 | catalytic, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HE637691 | 236 | 1 | 236 | 0 |
DR480951 | 217 | 1 | 217 | 0 |
DR486649 | 192 | 1 | 192 | 0 |
HE637691 | 55 | 246 | 300 | 4e-18 |
DR480951 | 36 | 246 | 281 | 0.000000004 |
Sequence Alignments (This image is cropped. Click for full image.) |
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