Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29661.m000910 |
Family | CBM43 |
Protein Properties | Length: 431 Molecular Weight: 46650.4 Isoelectric Point: 7.5826 |
Chromosome | Chromosome/Scaffold: 29661 Start: 146793 End: 148299 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 26 | 179 | 2e-25 |
SIQLLNLYDATPEVIQAMSHSAHPLAISVSLEDLTGVSSSVLKAENWLRTHVLAHFPATKITTIVVGSTILCQNEQDHNLGMILPSLRNIYYSLTRWGIE REVKVSAAFSFNCFNPNSILNKDDLAEKVIRPLLHFLHSVNSTYSINLPPNLSS | |||
CBM43 | 335 | 415 | 3e-33 |
WCVAKPSVPAETLQEALDYACGDGGADCAEIMPNGNCFYPDTVVAHASYAFNSYFQKNKRNGGSCSFGGTAMLITSDPSFS |
Full Sequence |
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Protein Sequence Length: 431 Download |
MLKMGFLLFN LFLLSFLGLT GAGQESIQLL NLYDATPEVI QAMSHSAHPL AISVSLEDLT 60 GVSSSVLKAE NWLRTHVLAH FPATKITTIV VGSTILCQNE QDHNLGMILP SLRNIYYSLT 120 RWGIEREVKV SAAFSFNCFN PNSILNKDDL AEKVIRPLLH FLHSVNSTYS INLPPNLSSL 180 SHEAMNLLSS KTESFKKFGS FGPNKINVVV NSQRHKLLMN RKLSTVESKI ANPFPARPTP 240 LPETSQPPIH SSIGFSVPAN IAKNPHPPLS YAASPPPLSY PHASPPPMVF PFAPQQPPFA 300 GPPAGGPYGY LPPCNPADTT IAPAPALGGI VQELWCVAKP SVPAETLQEA LDYACGDGGA 360 DCAEIMPNGN CFYPDTVVAH ASYAFNSYFQ KNKRNGGSCS FGGTAMLITS DPSFSSARDS 420 QAIMQVRNRE Y |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 1.0e-10 | 27 | 167 | 145 | + Glycosyl hydrolases family 17. | ||
pfam07983 | X8 | 1.0e-27 | 334 | 406 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-41 | 334 | 416 | 83 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI33700.1 | 0 | 1 | 180 | 1 | 181 | unnamed protein product [Vitis vinifera] |
EMBL | CBI36295.1 | 0 | 1 | 236 | 1 | 236 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_201547.1 | 0 | 4 | 418 | 1 | 376 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
RefSeq | XP_002279597.1 | 0 | 1 | 418 | 1 | 409 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002525263.1 | 0 | 1 | 431 | 1 | 431 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 3e-16 | 335 | 418 | 13 | 95 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 2cyg_A | 0.00000000003 | 26 | 178 | 26 | 178 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0.00000004 | 24 | 175 | 25 | 179 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0.00000004 | 24 | 175 | 25 | 179 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0.00000004 | 24 | 175 | 25 | 179 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |