Basic Information | |
---|---|
Species | Ricinus communis |
Cazyme ID | 29692.m000518 |
Family | CBM43 |
Protein Properties | Length: 533 Molecular Weight: 57093.6 Isoelectric Point: 5.7151 |
Chromosome | Chromosome/Scaffold: 29692 Start: 73205 End: 77203 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 361 | 442 | 7.7e-32 |
CVAKEGADPKMLQAALDWACGPGKVDCSAMLQGQPCYEPDNVVAHSTYAFNAYFQRMAKSPGTCDFKGVATITTTDPSHGSC | |||
GH17 | 23 | 342 | 0 |
IGVNVGTALSDMPSPTQVVALLKAQNIRHVRLYDADRAMLLALANTGIRVTVSVPNEQLLGIGQSNATAANWVARNVIAHVPATNITAIAVGSEVLTTLP NAAPVLVSALKFIHSALVASNLDGQIKVSTPHSSSIILDSFPPSQAFFNRTWDPVMVPLLKFLQSTGSYFMINVYPYYDYMQSNGVIPLDYALFRPLPPN KEAVDANTLLHYTNVFDALVDAAYFAMSYLNFTNVPIVVTESGWPSKGDSAEPDATIENANTYNSNLIRHVLNNTGTPKHPGIAVSTYIYELYNEDLRPG PASEKNWGLFYANGVPVYIL |
Full Sequence |
---|
Protein Sequence Length: 533 Download |
MAALFLLFLV MASATSADED SFIGVNVGTA LSDMPSPTQV VALLKAQNIR HVRLYDADRA 60 MLLALANTGI RVTVSVPNEQ LLGIGQSNAT AANWVARNVI AHVPATNITA IAVGSEVLTT 120 LPNAAPVLVS ALKFIHSALV ASNLDGQIKV STPHSSSIIL DSFPPSQAFF NRTWDPVMVP 180 LLKFLQSTGS YFMINVYPYY DYMQSNGVIP LDYALFRPLP PNKEAVDANT LLHYTNVFDA 240 LVDAAYFAMS YLNFTNVPIV VTESGWPSKG DSAEPDATIE NANTYNSNLI RHVLNNTGTP 300 KHPGIAVSTY IYELYNEDLR PGPASEKNWG LFYANGVPVY ILHLTGAGTV LANDTTNQTF 360 CVAKEGADPK MLQAALDWAC GPGKVDCSAM LQGQPCYEPD NVVAHSTYAF NAYFQRMAKS 420 PGTCDFKGVA TITTTDPSHG SCIFPGSAGR NGTLTNTTSL APSSNSTSSD SHQQHLYSAN 480 SFITYFSYKT ALVLCANLGC LSLSKFSPDS LGQLAAFPNF GPPGYELKGG KVD 540 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 7.0e-7 | 255 | 335 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-19 | 359 | 431 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-40 | 359 | 444 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 3.0e-93 | 23 | 340 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI26850.1 | 0 | 13 | 478 | 13 | 478 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002312452.1 | 0 | 20 | 484 | 1 | 465 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002314794.1 | 0 | 20 | 484 | 15 | 479 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527772.1 | 0 | 1 | 533 | 1 | 533 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
RefSeq | XP_002531922.1 | 0 | 19 | 471 | 30 | 481 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 23 | 340 | 1 | 308 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 23 | 345 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 23 | 345 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 23 | 345 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 23 | 345 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |