Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29762.m000502 |
Family | CBM43 |
Protein Properties | Length: 472 Molecular Weight: 50951.5 Isoelectric Point: 5.1333 |
Chromosome | Chromosome/Scaffold: 29762 Start: 215475 End: 218042 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 384 | 467 | 1.5e-33 |
WCVANGKIGKEKLQAGIDYACGEGGADCRPIQQGATCYNPNTVEAHASYAFNSYYQKKSRAAGTCYFGGAAYVVTQPPRYGNCE | |||
GH17 | 31 | 348 | 0 |
VGINYGRVANNLPSPEKVVELLKSQGINRVKLYDTDSTVLTALANSGITVVVALPNELLASTAADQSFADNWVQANISQYHPKTQIEAIAVGNEVFVDPQ NTTKYLVPAMKNVYNSLVKFNLSSIKISSPIALSSLQSSYPSSAGSFKPDLIEPVMKPMLEFLRKTGSYLMVNAYPFFAYAANSKEISLDYTLFKENPGV VDSGNGLKYFSLLEAQLDAVFAAMKAIQYDDVKMVVTETGWPSVGGEDEVGASEENAASYNGNLVKRVLTGNGTPLRPQDPLNVYLFALFNENLKPGPTS ERNYGLFYPNEEKVYDIS |
Full Sequence |
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Protein Sequence Length: 472 Download |
MKQSMASLAF SGPLFLFLLS FFVFADASGT VGINYGRVAN NLPSPEKVVE LLKSQGINRV 60 KLYDTDSTVL TALANSGITV VVALPNELLA STAADQSFAD NWVQANISQY HPKTQIEAIA 120 VGNEVFVDPQ NTTKYLVPAM KNVYNSLVKF NLSSIKISSP IALSSLQSSY PSSAGSFKPD 180 LIEPVMKPML EFLRKTGSYL MVNAYPFFAY AANSKEISLD YTLFKENPGV VDSGNGLKYF 240 SLLEAQLDAV FAAMKAIQYD DVKMVVTETG WPSVGGEDEV GASEENAASY NGNLVKRVLT 300 GNGTPLRPQD PLNVYLFALF NENLKPGPTS ERNYGLFYPN EEKVYDISLT QKELSTPGNQ 360 NKSQAPQASG GGGEVSKTAV GQTWCVANGK IGKEKLQAGI DYACGEGGAD CRPIQQGATC 420 YNPNTVEAHA SYAFNSYYQK KSRAAGTCYF GGAAYVVTQP PRYGNCEFPT GY 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.004 | 29 | 340 | 330 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-24 | 383 | 455 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-40 | 383 | 468 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 9.0e-96 | 31 | 348 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL77689.1 | 0 | 22 | 472 | 19 | 460 | AT5g55180/MCO15_13 [Arabidopsis thaliana] |
RefSeq | NP_568822.1 | 0 | 22 | 472 | 19 | 460 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002278044.1 | 0 | 5 | 472 | 1 | 471 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316783.1 | 0 | 28 | 472 | 1 | 449 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002529472.1 | 0 | 1 | 472 | 1 | 472 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 31 | 349 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 31 | 349 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 31 | 349 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghr_A | 0 | 31 | 349 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1aq0_B | 0 | 31 | 349 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |