Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29842.m003579 |
Family | CBM43 |
Protein Properties | Length: 533 Molecular Weight: 58368.8 Isoelectric Point: 6.4206 |
Chromosome | Chromosome/Scaffold: 29842 Start: 368371 End: 371080 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 388 | 469 | 1.4e-33 |
CIAMDGVDSRTLQAALDWACGPGRANCSEIQPGEGCYQPNNVKNHASYAFDSYYQKEGKAPGSCDFKGVAMITTTDPSHSSC | |||
GH17 | 50 | 369 | 0 |
VGLNIGTDVSDLLSATSLVSFLLVQKITHIRLYDANPDILKALAKTKIRIMISVPNNQLLAIGSSNTTAASWIDRNVAAYYPETLITSIAVGDEVLTTVP SSAPLLMPAIESLYSALVAANLHTQIKISTPHAASIILDPFPPSQSFFNQSWSSVMLPLLQFLSKTGSPLMMNLYPYYVFMQNKGVVPLDNSLFKPLTPS KEMVDPNTLLHYTNVLDAMIDAAYFSMKNLNVTDVVVLVTETGWPSKGDSKEPYATIDNADTYNSNLIKHVLDRSGTPFHPEITSSVYIYELFNEDLRSP PVSEANWGLFYGNSTPVYLL |
Full Sequence |
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Protein Sequence Length: 533 Download |
MANSKFSVLI FNIIFVLSVA VFKLSQAKSS GLALAQIKQQ KQDQDSEPFV GLNIGTDVSD 60 LLSATSLVSF LLVQKITHIR LYDANPDILK ALAKTKIRIM ISVPNNQLLA IGSSNTTAAS 120 WIDRNVAAYY PETLITSIAV GDEVLTTVPS SAPLLMPAIE SLYSALVAAN LHTQIKISTP 180 HAASIILDPF PPSQSFFNQS WSSVMLPLLQ FLSKTGSPLM MNLYPYYVFM QNKGVVPLDN 240 SLFKPLTPSK EMVDPNTLLH YTNVLDAMID AAYFSMKNLN VTDVVVLVTE TGWPSKGDSK 300 EPYATIDNAD TYNSNLIKHV LDRSGTPFHP EITSSVYIYE LFNEDLRSPP VSEANWGLFY 360 GNSTPVYLLH VYGSGTFLAN DTTNQTYCIA MDGVDSRTLQ AALDWACGPG RANCSEIQPG 420 EGCYQPNNVK NHASYAFDSY YQKEGKAPGS CDFKGVAMIT TTDPSHSSCI FPGSKKISNK 480 TRTVMNTTIS SGATDSSRLI IFRSSRTIII DKGLSNFLAV IFSILLYIPF VNY 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0005 | 290 | 362 | 76 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-23 | 386 | 458 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-41 | 386 | 471 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 8.0e-78 | 50 | 367 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 50 | 369 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 50 | 370 | 3 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 50 | 370 | 3 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 50 | 370 | 3 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 50 | 370 | 3 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |