Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29912.m005363 |
Family | CBM43 |
Protein Properties | Length: 511 Molecular Weight: 55656 Isoelectric Point: 6.3953 |
Chromosome | Chromosome/Scaffold: 29912 Start: 884560 End: 887754 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 367 | 449 | 6.5e-31 |
WCIASNNASQLDLQNALDWACGSGNVDCSAIQPSQPCFEPDTLVSHASFAFNGYYQQNGATDVACSFGGTGVKVDKDPSYDNC | |||
GH17 | 26 | 344 | 0 |
IGVCYGRNADDLPTPDKVAQLVQQQKIKYLRIYDSNIQVLKAFANTGVELMVGVPNSDLLALSQFQSNADSWLKNSILPYYPATKITYITVGAEVTEAPN NASALVVPAMHNVLTALKKVGLHKRIKVSSTHSLGVLSRSFPPSAGAFNSSHAFFLKPMLEFLAENQSPFMINIYPYYAFRDSPNNVTLDYALFQSSSEV IDPNTGLLYTNMFDAQIDALYFALTALNFRTIKVMVTETGWPSKGSLKETAATPDNAQTYNTNLIRHVINNSGTPAKPGEELDIYIFSLFNENRKPGLES ERNWGLFYPGGTSVYTLDF |
Full Sequence |
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Protein Sequence Length: 511 Download |
MAVGFKLIFA ISLLLTLLVF CRGSTIGVCY GRNADDLPTP DKVAQLVQQQ KIKYLRIYDS 60 NIQVLKAFAN TGVELMVGVP NSDLLALSQF QSNADSWLKN SILPYYPATK ITYITVGAEV 120 TEAPNNASAL VVPAMHNVLT ALKKVGLHKR IKVSSTHSLG VLSRSFPPSA GAFNSSHAFF 180 LKPMLEFLAE NQSPFMINIY PYYAFRDSPN NVTLDYALFQ SSSEVIDPNT GLLYTNMFDA 240 QIDALYFALT ALNFRTIKVM VTETGWPSKG SLKETAATPD NAQTYNTNLI RHVINNSGTP 300 AKPGEELDIY IFSLFNENRK PGLESERNWG LFYPGGTSVY TLDFTGRGVV DVPKNTSITG 360 FNGTTTWCIA SNNASQLDLQ NALDWACGSG NVDCSAIQPS QPCFEPDTLV SHASFAFNGY 420 YQQNGATDVA CSFGGTGVKV DKDPSYDNCL YMTTGTNKTA TSNTTAIASS TSSSSSPRND 480 VSKWALSFLL MALFALLNIH SAQESFIVKA W |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-8 | 24 | 333 | 323 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 4.0e-20 | 366 | 438 | 82 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-38 | 366 | 451 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-112 | 26 | 344 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABD91576.1 | 0 | 1 | 466 | 1 | 470 | beta-1,3-glucanase [Medicago sativa] |
GenBank | ABD91577.1 | 0 | 1 | 466 | 1 | 470 | beta-1,3-glucanase [Medicago sativa] |
RefSeq | XP_002283473.1 | 0 | 1 | 497 | 1 | 494 | PREDICTED: similar to beta-1,3-glucanase [Vitis vinifera] |
RefSeq | XP_002330523.1 | 0 | 21 | 455 | 22 | 455 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514201.1 | 0 | 1 | 511 | 1 | 511 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 344 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 26 | 345 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 26 | 345 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 26 | 345 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 26 | 345 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |