Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30084.m000179 |
Family | CBM43 |
Protein Properties | Length: 436 Molecular Weight: 46176 Isoelectric Point: 4.705 |
Chromosome | Chromosome/Scaffold: 30084 Start: 28694 End: 32067 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 302 | 383 | 3.9e-32 |
CVAKQNADSAKLQEGLNWACGQGGANCTAIQEGRPCYAPNNIQNHASYAYNDYYQKMHSAGGTCDFDGSATTTTVDPSYGSC | |||
GH17 | 167 | 286 | 7.7e-37 |
PIVDPNTLSHYNSMFDAMVDATYYAIDAFNSTGIPIVVTETGWPWLGGANEPDATANNAETFNNNLIRRVLNDSGPPSQPTIPISTYIYELFNEDKRPGP VSERNWGLYFTNGTAVYSLS | |||
GH17 | 26 | 152 | 7.80005e-41 |
IGINIGTDVSNMPPASDVVAILKTNQITHVRLYDADAHMLKALANSGIEVMVGITNEEVLGIGESPAAAAAWINKNVASYLPSTNITAIAVGSEVLTSIP NAAPVLVPAMNYLHKALVASNLNFQSK |
Full Sequence |
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Protein Sequence Length: 436 Download |
MVLKKWLGGL LLLLVGMISN TGGAFIGINI GTDVSNMPPA SDVVAILKTN QITHVRLYDA 60 DAHMLKALAN SGIEVMVGIT NEEVLGIGES PAAAAAWINK NVASYLPSTN ITAIAVGSEV 120 LTSIPNAAPV LVPAMNYLHK ALVASNLNFQ SKFQLLNPWT LSPDLSPIVD PNTLSHYNSM 180 FDAMVDATYY AIDAFNSTGI PIVVTETGWP WLGGANEPDA TANNAETFNN NLIRRVLNDS 240 GPPSQPTIPI STYIYELFNE DKRPGPVSER NWGLYFTNGT AVYSLSLSAS DRITGNSSSV 300 FCVAKQNADS AKLQEGLNWA CGQGGANCTA IQEGRPCYAP NNIQNHASYA YNDYYQKMHS 360 AGGTCDFDGS ATTTTVDPSY GSCIFTGSSN SSTSGGIFPP VAFGPISPQG GSTSLRFQAS 420 KVQSLLSAAF LAFILI |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 1.0e-20 | 126 | 286 | 162 | + Glycosyl hydrolases family 17. | ||
pfam07983 | X8 | 3.0e-21 | 302 | 372 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-24 | 26 | 147 | 122 | + Glycosyl hydrolases family 17. | ||
smart00768 | X8 | 2.0e-35 | 301 | 380 | 80 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB01763.1 | 0 | 37 | 416 | 1 | 441 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
DDBJ | BAH57260.1 | 0 | 1 | 379 | 1 | 440 | AT3G13560 [Arabidopsis thaliana] |
RefSeq | NP_187965.1 | 0 | 1 | 416 | 1 | 477 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002297638.1 | 0 | 37 | 436 | 1 | 461 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532062.1 | 0 | 1 | 436 | 1 | 436 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 2e-33 | 26 | 287 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 5e-33 | 26 | 287 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 5e-33 | 26 | 287 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 7e-32 | 26 | 288 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 7e-32 | 26 | 288 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |