Basic Information | |
---|---|
Species | Brachypodium distachyon |
Cazyme ID | Bradi1g25530.1 |
Family | CBM43 |
Protein Properties | Length: 549 Molecular Weight: 57549.1 Isoelectric Point: 6.4212 |
Chromosome | Chromosome/Scaffold: 1 Start: 20757667 End: 20762902 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 374 | 454 | 6.6e-33 |
WCVARSDVGDARLQAALDYACGHGADCSAIQPGKACYEPNTKAAHASYAFNDYYQSKGRASGTCDFAGAASVVYQQPSGTC | |||
CBM43 | 461 | 542 | 1.7e-33 |
WCVANAAVGDARLQAALDYACGHGADCGAIQPGAQCFDPNTKVAHASYAMNDYYQRNGRTARSCDFGGAGSVVHQAPNTGNC | |||
GH17 | 28 | 359 | 0 |
VGVSYGRIGNNLMDPASVVQLLNQNGITSIRVYDTDEAVLNSMANTGIKILVGLPNELVASAADDPSYALRWVQDNVKRHYPDAKINGVTVGNEVFNQAS QLTSKLVPAMKNVQAALARLGLADAIKVTTPIALNALKQSSPPSQGAFRDDIAQSVMSPMLDFLDQTGSYLMVNIYPYYTYKDQQGDFSLAYATSGQNDG VLDSGTGVRYYSLFDAQLAAVHYANRRRGHPRVHVVVGETGWCSYCNNAVASKENAASYVNNVIRSTHSSSGGSAGTMGSNRTLAVGAAGAGTNGDFSVY IFALFNENQKPADEQNFGLFYPNGQAVYQVDF |
Full Sequence |
---|
Protein Sequence Length: 549 Download |
MALTCLLIVL LCVSLSLLFV NHAEAGEVGV SYGRIGNNLM DPASVVQLLN QNGITSIRVY 60 DTDEAVLNSM ANTGIKILVG LPNELVASAA DDPSYALRWV QDNVKRHYPD AKINGVTVGN 120 EVFNQASQLT SKLVPAMKNV QAALARLGLA DAIKVTTPIA LNALKQSSPP SQGAFRDDIA 180 QSVMSPMLDF LDQTGSYLMV NIYPYYTYKD QQGDFSLAYA TSGQNDGVLD SGTGVRYYSL 240 FDAQLAAVHY ANRRRGHPRV HVVVGETGWC SYCNNAVASK ENAASYVNNV IRSTHSSSGG 300 SAGTMGSNRT LAVGAAGAGT NGDFSVYIFA LFNENQKPAD EQNFGLFYPN GQAVYQVDFR 360 GGGGGGGGGG TASWCVARSD VGDARLQAAL DYACGHGADC SAIQPGKACY EPNTKAAHAS 420 YAFNDYYQSK GRASGTCDFA GAASVVYQQP SGTCDPKAAS WCVANAAVGD ARLQAALDYA 480 CGHGADCGAI QPGAQCFDPN TKVAHASYAM NDYYQRNGRT ARSCDFGGAG SVVHQAPNTG 540 NCVLPSRA* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 9.0e-23 | 460 | 531 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
pfam07983 | X8 | 6.0e-24 | 373 | 444 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 9.0e-37 | 460 | 543 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
smart00768 | X8 | 3.0e-37 | 373 | 454 | 83 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 8.0e-85 | 28 | 359 | 334 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ04201.1 | 0 | 20 | 545 | 21 | 552 | hypothetical protein OsI_26344 [Oryza sativa Indica Group] |
GenBank | EAZ40149.1 | 0 | 20 | 545 | 21 | 552 | hypothetical protein OsJ_24593 [Oryza sativa Japonica Group] |
GenBank | EEC82195.1 | 0 | 1 | 545 | 1 | 547 | hypothetical protein OsI_26335 [Oryza sativa Indica Group] |
RefSeq | NP_001059878.1 | 0 | 1 | 545 | 1 | 547 | Os07g0538000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001059886.1 | 0 | 23 | 545 | 46 | 574 | Os07g0539400 [Oryza sativa (japonica cultivar-group)] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 28 | 359 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 27 | 359 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 27 | 359 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 27 | 359 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 27 | 359 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |