Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi1g61320.1 |
Family | CBM43 |
Protein Properties | Length: 443 Molecular Weight: 45324.1 Isoelectric Point: 6.7722 |
Chromosome | Chromosome/Scaffold: 1 Start: 60701413 End: 60703881 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 241 | 322 | 7.4e-30 |
CVALQNADPTALQAGLSWACGQGQADCSAIQPGGACYKQNNLAALASYAYNDYYQKNAGTGATCSFNGTATTTATDPSAGSC | |||
GH17 | 30 | 174 | 3.5e-30 |
PSDLAKIVQSKQTKQARVCGADHRLLRSLANTGEEVILTIPNEQLQHMAEFREEADLWVAANVVPFLPATRITHILAGINVLHSSSQTGEESSYLLVPAM LNLHAALVAARLDGHVKVSTALTSGAAATGHLLRFLKETGSPFFL |
Full Sequence |
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Protein Sequence Length: 443 Download |
MLRERWQGCV FLLALLLSNA SGTTSLGVLP SDLAKIVQSK QTKQARVCGA DHRLLRSLAN 60 TGEEVILTIP NEQLQHMAEF REEADLWVAA NVVPFLPATR ITHILAGINV LHSSSQTGEE 120 SSYLLVPAML NLHAALVAAR LDGHVKVSTA LTSGAAATGH LLRFLKETGS PFFLLSAPNK 180 ATNARADHVY GAMRALKFSG VPLIVAETES EELDGKLVYR SYYMDGSGSG RRRSLATGTF 240 CVALQNADPT ALQAGLSWAC GQGQADCSAI QPGGACYKQN NLAALASYAY NDYYQKNAGT 300 GATCSFNGTA TTTATDPSAG SCVFEGSTTA GGSNSSVPTA SPPTSLAPPS GLTPPTGSSP 360 PSDFGPPAAG FGPPSGFGPP SGFGSPPSAF GPPGSFNGSG TFGPSGTLEP YGSGCRHVAS 420 LAGLTLLSAA LLAVLVASPD LM* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-12 | 239 | 311 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-16 | 26 | 147 | 128 | + Glycosyl hydrolases family 17. | ||
smart00768 | X8 | 8.0e-28 | 239 | 324 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC75349.1 | 0 | 1 | 326 | 2 | 352 | hypothetical protein OsI_11774 [Oryza sativa Indica Group] |
RefSeq | NP_001050214.1 | 0 | 1 | 397 | 2 | 433 | Os03g0374600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001149308.1 | 0 | 1 | 345 | 1 | 466 | glucan endo-1,3-beta-glucosidase 4 [Zea mays] |
RefSeq | XP_002460914.1 | 0 | 1 | 345 | 1 | 466 | hypothetical protein SORBIDRAFT_02g037380 [Sorghum bicolor] |
RefSeq | XP_002467792.1 | 0 | 30 | 425 | 7 | 410 | hypothetical protein SORBIDRAFT_01g034190 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.0000000000001 | 236 | 324 | 9 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 2cyg_A | 0.000000000003 | 30 | 178 | 15 | 175 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0.00000000009 | 31 | 151 | 16 | 128 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0.00000000009 | 31 | 151 | 16 | 128 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 4gzj_A | 0.000000004 | 29 | 154 | 14 | 138 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |