| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma02g46330.1 |
| Family | CBM43 |
| Protein Properties | Length: 472 Molecular Weight: 50384.8 Isoelectric Point: 4.8962 |
| Chromosome | Chromosome/Scaffold: 02 Start: 50317321 End: 50320111 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 384 | 467 | 5.5e-35 |
| WCVASGGSSEKKLQNALNYACGEGGADCTPIQPGATCYNPNTLEAHASYAFNSYYQKKARASGTCDFGGTAYVVTQPPKYGNCE | |||
| GH17 | 31 | 348 | 0 |
| VGINYGRVANDLPTPAKVVELLKAQGLNRVKLYDTDATVLTAFANSGIKVVVAMPNELLANAAADQSFTDAWVQANISTYYPATQIEAIAVGNEVFVDPN NTTKFLVPAMKNVHASLTKYNLDKNIKISSPIALSALQNSFPASSGSFKTELVEPVIKPMLDLLRQTGSYLMVNAYPFFAYAANSDKISLDYALFKENPG VVDSGNGLKYTNLFDAQIDAVFAAMSALKYEDVKIAVSETGWPSAGDSNEIGASPDNAASYNGNLVKRVMSGSGTPLKQNESLDVFLFALFNENQKTGPT SERNYGLFYPTEKKVYDI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 472 Download |
| MLCKLSMAPL AFSFFFILIT FFSSSSEAGS VGINYGRVAN DLPTPAKVVE LLKAQGLNRV 60 KLYDTDATVL TAFANSGIKV VVAMPNELLA NAAADQSFTD AWVQANISTY YPATQIEAIA 120 VGNEVFVDPN NTTKFLVPAM KNVHASLTKY NLDKNIKISS PIALSALQNS FPASSGSFKT 180 ELVEPVIKPM LDLLRQTGSY LMVNAYPFFA YAANSDKISL DYALFKENPG VVDSGNGLKY 240 TNLFDAQIDA VFAAMSALKY EDVKIAVSET GWPSAGDSNE IGASPDNAAS YNGNLVKRVM 300 SGSGTPLKQN ESLDVFLFAL FNENQKTGPT SERNYGLFYP TEKKVYDIPL TAEEIKEAPP 360 SGVGKSQVPV SGEVSTTTSK GQTWCVASGG SSEKKLQNAL NYACGEGGAD CTPIQPGATC 420 YNPNTLEAHA SYAFNSYYQK KARASGTCDF GGTAYVVTQP PKYGNCEFPT G* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.007 | 203 | 339 | 148 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 5.0e-26 | 383 | 455 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 5.0e-42 | 383 | 468 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-104 | 31 | 348 | 318 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL77689.1 | 0 | 26 | 471 | 22 | 459 | AT5g55180/MCO15_13 [Arabidopsis thaliana] |
| GenBank | AAM66024.1 | 0 | 26 | 471 | 22 | 459 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_568822.1 | 0 | 26 | 471 | 22 | 459 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002316783.1 | 0 | 28 | 471 | 1 | 448 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002529472.1 | 0 | 4 | 471 | 2 | 471 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghs_B | 0 | 31 | 348 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 31 | 348 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 2cyg_A | 0 | 31 | 348 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 31 | 348 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 31 | 348 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
