| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma08g04780.2 |
| Family | CBM43 |
| Protein Properties | Length: 500 Molecular Weight: 53748.9 Isoelectric Point: 5.2862 |
| Chromosome | Chromosome/Scaffold: 08 Start: 3404543 End: 3409630 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 365 | 446 | 3.6e-32 |
| CVTKSNADPKMLQAALDWACGPGKVDCSPLLQGQPCYEPDNVVAHSTYAFNAYYQKMDKSPGSCDFKGVATVTTTDPSHGSC | |||
| GH17 | 27 | 346 | 0 |
| IGVNIGSDISDMPGSTEIVSLLKAQSIQHVRLYDADRALLLALANTGIRVTVSVPNDQLLGIGQSNATAANWVTRNVIAHVPATNITAICVGSEVLTTLP NAAPIIVSAINFIHSALVAANLDQQIKISSPHSSSIILDSFPPSQAFFNRTWNPVMVPMLKFLQSTGSYLMLNVYPYYDYQQSNGVIPLDYALFRPLPPN KEAVDSNTLLHYTNVFDAVVDAAYFAMSDLNFTNIPIMVTESGWPSKGDSSESDATVDNANTYNSNLIRHVLNNTGTPKHPGIAVSTYIYELYNEDLRSG PVSEKNWGLFYANGEPVYTL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 500 Download |
| MFITFMAVLL LFFMLPLSIS ASGDAFIGVN IGSDISDMPG STEIVSLLKA QSIQHVRLYD 60 ADRALLLALA NTGIRVTVSV PNDQLLGIGQ SNATAANWVT RNVIAHVPAT NITAICVGSE 120 VLTTLPNAAP IIVSAINFIH SALVAANLDQ QIKISSPHSS SIILDSFPPS QAFFNRTWNP 180 VMVPMLKFLQ STGSYLMLNV YPYYDYQQSN GVIPLDYALF RPLPPNKEAV DSNTLLHYTN 240 VFDAVVDAAY FAMSDLNFTN IPIMVTESGW PSKGDSSESD ATVDNANTYN SNLIRHVLNN 300 TGTPKHPGIA VSTYIYELYN EDLRSGPVSE KNWGLFYANG EPVYTLHLTG AGIIFANDTT 360 NQTFCVTKSN ADPKMLQAAL DWACGPGKVD CSPLLQGQPC YEPDNVVAHS TYAFNAYYQK 420 MDKSPGSCDF KGVATVTTTD PSHGSCIFPG SHGRKGTRTN GTSLAPSNST SSGCLSQYHD 480 NGGFFTSSLI LVLLLCAVV* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 9.0e-7 | 259 | 339 | 85 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 4.0e-20 | 363 | 435 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-40 | 363 | 448 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-65 | 27 | 346 | 320 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI26850.1 | 0 | 21 | 466 | 17 | 462 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002301689.1 | 0 | 19 | 499 | 1 | 479 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002312452.1 | 0 | 24 | 498 | 1 | 476 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002314794.1 | 0 | 17 | 499 | 8 | 491 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527772.1 | 0 | 7 | 497 | 3 | 496 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 27 | 348 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 27 | 349 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 27 | 349 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 27 | 349 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 27 | 349 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
