| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma08g12020.1 |
| Family | CBM43 |
| Protein Properties | Length: 497 Molecular Weight: 53032.9 Isoelectric Point: 4.7671 |
| Chromosome | Chromosome/Scaffold: 08 Start: 8700498 End: 8704720 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 362 | 443 | 2.5e-33 |
| CVAKDGADTDKLQSGLSWACGQGGANCAAIQPGQPCYLPNNVKSHASYAYNDYYQRKHSSGGTCDFDGTATITTKDPSSSSC | |||
| GH17 | 26 | 347 | 0 |
| VGVNIGTDVSDLPSASNIVDILQANQITHVRLYDANAHLLQALSNTSIEVIVGVTNEEVLRIGESPSAAATWINKNVVAYVPSTNITGIAVGSEVLSTIP NVAPVLVPAMNSLHKALVAANLNFRVKVSTPQSMDIIPKPFPPSTATFNSSWNSTIYQLLQFLKNTNSSYMLNAYPYYGYTKGDGIFPIEYALFRPLPSV KQIVDPNTLFHYNSMFDAMVDATYYSIEALNFNNIPIVVTETGWPSFGGANEPDATEENAELYINNMIQRVMNDSGPPSQPNIAINTYIYELFNEDKRNG PVSEKNWGIFYTNGSTVYPLSF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 497 Download |
| MKLKTWLASV LLLTVAMLTA TLGAFVGVNI GTDVSDLPSA SNIVDILQAN QITHVRLYDA 60 NAHLLQALSN TSIEVIVGVT NEEVLRIGES PSAAATWINK NVVAYVPSTN ITGIAVGSEV 120 LSTIPNVAPV LVPAMNSLHK ALVAANLNFR VKVSTPQSMD IIPKPFPPST ATFNSSWNST 180 IYQLLQFLKN TNSSYMLNAY PYYGYTKGDG IFPIEYALFR PLPSVKQIVD PNTLFHYNSM 240 FDAMVDATYY SIEALNFNNI PIVVTETGWP SFGGANEPDA TEENAELYIN NMIQRVMNDS 300 GPPSQPNIAI NTYIYELFNE DKRNGPVSEK NWGIFYTNGS TVYPLSFGAS DQITGNSSGV 360 FCVAKDGADT DKLQSGLSWA CGQGGANCAA IQPGQPCYLP NNVKSHASYA YNDYYQRKHS 420 SGGTCDFDGT ATITTKDPSS SSCIFAGSSN SSTGGLSLPP TALGPSGPFG ASMNLQVSSL 480 KYLISAVGVF LALAVL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 3.0e-5 | 259 | 338 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-22 | 362 | 432 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-40 | 361 | 445 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-81 | 26 | 347 | 322 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAH57260.1 | 0 | 1 | 439 | 1 | 440 | AT3G13560 [Arabidopsis thaliana] |
| EMBL | CAN72077.1 | 0 | 27 | 448 | 27 | 448 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_187965.1 | 0 | 1 | 477 | 1 | 478 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002283548.1 | 0 | 27 | 445 | 27 | 445 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002297638.1 | 0 | 37 | 496 | 1 | 461 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 26 | 347 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 26 | 347 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 26 | 347 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 26 | 347 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 26 | 347 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
