| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma16g26800.3 |
| Family | CBM43 |
| Protein Properties | Length: 447 Molecular Weight: 47860.2 Isoelectric Point: 5.8653 |
| Chromosome | Chromosome/Scaffold: 16 Start: 30863735 End: 30869345 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 311 | 392 | 2.4e-32 |
| CVAKSNADSKMLQAALDWACGPGKVDCSPLLQGQSCYEPNSVASHATYAINSYYQQMAKSAGTCDFKGVASITTTNPSHGSC | |||
| GH17 | 32 | 292 | 0 |
| LGIGQSNATAANWVARNVIAHVPATNITAIAVGSEVLTSLPNAAPVLVSALKFIQAALVAANLDQQIKVSTPHSSSVILDSFPPSQAFFNKTWDPVMVPL LNFLQSTGSYLMLNVYPYYDYMQSNGVVPLDYALFRPLPPNKEAIDSNTLLHYTNVFDAIVDAAYFAMSYLKFTNIPILVTESGWPSKGDSSEPDATVDN ANTYNSNLIRHVLNNSGTPKQPGIAVSTYIYELYNEDLKSGPVSENNWGLFYASGAQVYTL | |||
| Full Sequence |
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| Protein Sequence Length: 447 Download |
| MEMLSLVSTL VQMSPTCQVQ QRLLPFLRLK ILGIGQSNAT AANWVARNVI AHVPATNITA 60 IAVGSEVLTS LPNAAPVLVS ALKFIQAALV AANLDQQIKV STPHSSSVIL DSFPPSQAFF 120 NKTWDPVMVP LLNFLQSTGS YLMLNVYPYY DYMQSNGVVP LDYALFRPLP PNKEAIDSNT 180 LLHYTNVFDA IVDAAYFAMS YLKFTNIPIL VTESGWPSKG DSSEPDATVD NANTYNSNLI 240 RHVLNNSGTP KQPGIAVSTY IYELYNEDLK SGPVSENNWG LFYASGAQVY TLHLTNSGTV 300 FANDTTNQTF CVAKSNADSK MLQAALDWAC GPGKVDCSPL LQGQSCYEPN SVASHATYAI 360 NSYYQQMAKS AGTCDFKGVA SITTTNPSHG SCIFSGSGGK NVTSVNGTAL APSTNSTNSG 420 CLSQYYNGGF FTSTVILTLI LSVVVL* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 7.0e-6 | 205 | 285 | 85 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-20 | 309 | 381 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-38 | 309 | 394 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 5.0e-68 | 31 | 292 | 270 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI26850.1 | 0 | 30 | 426 | 80 | 476 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI33479.1 | 0 | 30 | 425 | 79 | 472 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002312452.1 | 0 | 30 | 446 | 61 | 479 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002314794.1 | 0 | 30 | 446 | 75 | 493 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527772.1 | 0 | 30 | 412 | 80 | 462 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 21 | 294 | 49 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 39 | 294 | 68 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 39 | 294 | 68 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 39 | 294 | 68 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 39 | 294 | 68 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DR951683 | 280 | 30 | 309 | 0 |
| GE476981 | 314 | 44 | 357 | 0 |
| GO371467 | 293 | 102 | 394 | 0 |
| HS258579 | 258 | 30 | 287 | 0 |
| HS013357 | 258 | 30 | 287 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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