Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma16g26800.7 |
Family | CBM43 |
Protein Properties | Length: 324 Molecular Weight: 34558.2 Isoelectric Point: 6.3392 |
Chromosome | Chromosome/Scaffold: 16 Start: 30863735 End: 30869345 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 139 | 220 | 3.5e-28 |
VTESGWPSKGDSSEPDATVDNANTYNSNLIRHVLNNSGTPKQPGIAVSTYIYELYNEDLKSGPVSENNWGLFYASGAQVYTL | |||
CBM43 | 239 | 316 | 2.7e-30 |
CVAKSNADSKMLQAALDWACGPGKVDCSPLLQGQSCYEPNSVASHATYAINSYYQQMAKSAGTCDFKGVASITTTNPM | |||
GH17 | 33 | 138 | 2.9e-32 |
GIGQSNATAANWVARNVIAHVPATNITAIAVGSEVLTSLPNAAPVLVSALKFIQAALVAANLDQQIKVSTPHSSSVILDSFPPSQAFFNKTWDPVMVPLL NFLQST |
Full Sequence |
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Protein Sequence Length: 324 Download |
MEMLSLVSTL VQMSPTCQVQ QRLLPFLRLK ILGIGQSNAT AANWVARNVI AHVPATNITA 60 IAVGSEVLTS LPNAAPVLVS ALKFIQAALV AANLDQQIKV STPHSSSVIL DSFPPSQAFF 120 NKTWDPVMVP LLNFLQSTVT ESGWPSKGDS SEPDATVDNA NTYNSNLIRH VLNNSGTPKQ 180 PGIAVSTYIY ELYNEDLKSG PVSENNWGLF YASGAQVYTL HLTNSGTVFA NDTTNQTFCV 240 AKSNADSKML QAALDWACGP GKVDCSPLLQ GQSCYEPNSV ASHATYAINS YYQQMAKSAG 300 TCDFKGVASI TTTNPMVVKM LPA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-5 | 58 | 213 | 181 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 5.0e-22 | 237 | 309 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-22 | 139 | 220 | 82 | + Glycosyl hydrolases family 17. | ||
smart00768 | X8 | 3.0e-35 | 237 | 315 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN82488.1 | 0 | 30 | 315 | 47 | 404 | hypothetical protein [Vitis vinifera] |
EMBL | CBI26850.1 | 0 | 30 | 315 | 80 | 437 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002312452.1 | 0 | 30 | 315 | 61 | 418 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002314794.1 | 0 | 30 | 315 | 75 | 432 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527772.1 | 0 | 30 | 315 | 80 | 437 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 9e-18 | 73 | 222 | 165 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 2cyg_A | 0.00000000005 | 21 | 137 | 49 | 164 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 3e-16 | 135 | 223 | 230 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0.00000003 | 39 | 135 | 68 | 166 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 3e-16 | 135 | 223 | 230 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BE020606 | 157 | 139 | 295 | 0 |
ES813822 | 177 | 139 | 315 | 0 |
GD083188 | 186 | 132 | 315 | 0 |
HS253134 | 189 | 132 | 318 | 0 |
HS007912 | 189 | 132 | 318 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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