Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma17g01601.2 |
Family | CBM43 |
Protein Properties | Length: 493 Molecular Weight: 53719 Isoelectric Point: 5.5276 |
Chromosome | Chromosome/Scaffold: 17 Start: 972034 End: 975293 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 404 | 485 | 9.7e-34 |
CIAMDGFDSKTLQAALDWACGPGRANCSEIQPGETCFQPNNVKNHASYAFDSYYQKEGKAQGTCDFKGLAMITTTDPSHGSC | |||
GH17 | 66 | 385 | 0 |
VGVNIGTDVSNLPSASDLVAFLQLQKITHVRIYDANSDILKTLSGTKIRVIISVPNNQLLAIGSSNSTAASWIDRNVVAYYPQTLISGISVGDEVLTTVP SSAPLILPAVESLYNALVASNLHQHIKVSTPHAASIILDPFPPSQAYFNQSLVSVILPLLQFLSRTGSPLTMNLYPYYVFMQNKGVVPLDNALFKPLTPN KEMVDPNTLLHYTNVLDAMVDAAYFSMKNLNITDVAVLVTETGWPAKGDSKEPYATKDNADTYNSNLIRHVFDRTGTPLHPETTSSVFIYELFNEDLRAP PVSEANWGLFYGNTSPAYLL |
Full Sequence |
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Protein Sequence Length: 493 Download |
MLQLAHVISS TRAEAGMRKL SLGSFSMANS NLVIILYFSF FTFAEAEALH SQLKQQIQDQ 60 EKLPFVGVNI GTDVSNLPSA SDLVAFLQLQ KITHVRIYDA NSDILKTLSG TKIRVIISVP 120 NNQLLAIGSS NSTAASWIDR NVVAYYPQTL ISGISVGDEV LTTVPSSAPL ILPAVESLYN 180 ALVASNLHQH IKVSTPHAAS IILDPFPPSQ AYFNQSLVSV ILPLLQFLSR TGSPLTMNLY 240 PYYVFMQNKG VVPLDNALFK PLTPNKEMVD PNTLLHYTNV LDAMVDAAYF SMKNLNITDV 300 AVLVTETGWP AKGDSKEPYA TKDNADTYNS NLIRHVFDRT GTPLHPETTS SVFIYELFNE 360 DLRAPPVSEA NWGLFYGNTS PAYLLHVSGI GTFLANDTTN QTYCIAMDGF DSKTLQAALD 420 WACGPGRANC SEIQPGETCF QPNNVKNHAS YAFDSYYQKE GKAQGTCDFK GLAMITTTDP 480 SHGSCIFPGS LP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-6 | 298 | 378 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 4.0e-23 | 402 | 474 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-42 | 402 | 487 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-86 | 66 | 383 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC17632.1 | 0 | 56 | 481 | 34 | 459 | Similar to glucan endo-1,3-beta-D-glucosidase precursor gb |
EMBL | CBI23232.1 | 0 | 17 | 490 | 1 | 471 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002316541.1 | 0 | 79 | 490 | 2 | 413 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332610.1 | 0 | 79 | 490 | 2 | 413 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518468.1 | 0 | 25 | 490 | 6 | 474 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 66 | 385 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 66 | 388 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 66 | 388 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 66 | 388 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 66 | 388 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |