Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma17g29820.2 |
Family | CBM43 |
Protein Properties | Length: 499 Molecular Weight: 53531.2 Isoelectric Point: 6.5057 |
Chromosome | Chromosome/Scaffold: 17 Start: 32686050 End: 32689699 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 362 | 443 | 1.3e-32 |
CVAKDDADTDKLQAGLSWACGQGQANCIAIQPGRPCYSPNNVKNHASYAYNDYYQKMHNAGGTCDFDGTATTTTEDPSYGSC | |||
GH17 | 26 | 347 | 0 |
VGVNIGTDVTDLPSASNVVAILKSHQITHVRLYNANGHMLQALSNTGIEVIVGVTDEEILGIGESASVAAAWISKNVAAYMPSTNITAISVGSEVLTSVP NVAPVLVPAMNHLHTALVASNLNFRVKVSTPQSMDVISRPFPPSTATFNSSWNSTIYQLLQFLKNTNSSYMLNAYPYYGYTKGDGIFPIEYALFRPLSPV KQIVDPNTLFHYNSMFEAMVDATYYAIEAFNFNNIPIVVTETGWPSFGGANEPDATTKNSETYNNNLIKRVINGSGPPSQPKIAINTYLYELFNEDKRKG PISERNWGVFYANGSSVYSLSF |
Full Sequence |
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Protein Sequence Length: 499 Download |
MKLKRWLGSV LFLIVATVSN AAGAFVGVNI GTDVTDLPSA SNVVAILKSH QITHVRLYNA 60 NGHMLQALSN TGIEVIVGVT DEEILGIGES ASVAAAWISK NVAAYMPSTN ITAISVGSEV 120 LTSVPNVAPV LVPAMNHLHT ALVASNLNFR VKVSTPQSMD VISRPFPPST ATFNSSWNST 180 IYQLLQFLKN TNSSYMLNAY PYYGYTKGDG IFPIEYALFR PLSPVKQIVD PNTLFHYNSM 240 FEAMVDATYY AIEAFNFNNI PIVVTETGWP SFGGANEPDA TTKNSETYNN NLIKRVINGS 300 GPPSQPKIAI NTYLYELFNE DKRKGPISER NWGVFYANGS SVYSLSFSAS NMSNANSQGS 360 FCVAKDDADT DKLQAGLSWA CGQGQANCIA IQPGRPCYSP NNVKNHASYA YNDYYQKMHN 420 AGGTCDFDGT ATTTTEDPSY GSCIYAGSAN TRNGGRSSSS TALGLGPVSP VGAGLNLQVS 480 TLQYLISFIS VFFSLLLS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-5 | 38 | 338 | 314 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-15 | 362 | 421 | 65 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-28 | 361 | 445 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 3.0e-77 | 26 | 343 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAH57260.1 | 0 | 1 | 439 | 1 | 440 | AT3G13560 [Arabidopsis thaliana] |
EMBL | CAN72077.1 | 0 | 27 | 448 | 27 | 448 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_187965.1 | 0 | 1 | 479 | 1 | 478 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002283548.1 | 0 | 27 | 445 | 27 | 445 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002297638.1 | 0 | 37 | 497 | 1 | 460 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 347 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 26 | 347 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 26 | 347 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 0 | 26 | 348 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 0 | 26 | 348 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |