Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma18g04560.1 |
Family | CBM43 |
Protein Properties | Length: 499 Molecular Weight: 53931.4 Isoelectric Point: 5.4634 |
Chromosome | Chromosome/Scaffold: 18 Start: 3333671 End: 3337460 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 361 | 442 | 1.1e-31 |
CVAKDGADPKMLQAGIDWACGPGKVDCSPLLQGQPCYEPDNVVAHANYAFDTYYHQMGKSPQSCDFNGMATISTTNPSHGSC | |||
GH17 | 23 | 342 | 0 |
IGVNIGRDLSDMPHPTQVVALLKAQQIRHVRLYDADQAMLIALANTRIQVAVSVPNQEILAIGQSNTTAAKWVSHNVIAHYPATNITTICVGSDVLTTLP YAAKVLVSALKFIHSALVASNLDHQIKVSTPLSSSMILDSFPPSQAFFNRSLNPVLVPMLDFLQTTGSYLMLNIYPYYDYMQSNGVIPLDYALFKPLPPN KEAIDSNSLLHYSNVFDAAVDAAYVAMAFLNYTNIRVVVTETGWPSKGDSNEPDATVENANTYNSNLIKHVLNITGTPKHPGIGVSTYIYELYNEDAKAG PLSEKNWGLFDANGKPVYVL |
Full Sequence |
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Protein Sequence Length: 499 Download |
MAKHFLLLLF AVYVAAIDEE PFIGVNIGRD LSDMPHPTQV VALLKAQQIR HVRLYDADQA 60 MLIALANTRI QVAVSVPNQE ILAIGQSNTT AAKWVSHNVI AHYPATNITT ICVGSDVLTT 120 LPYAAKVLVS ALKFIHSALV ASNLDHQIKV STPLSSSMIL DSFPPSQAFF NRSLNPVLVP 180 MLDFLQTTGS YLMLNIYPYY DYMQSNGVIP LDYALFKPLP PNKEAIDSNS LLHYSNVFDA 240 AVDAAYVAMA FLNYTNIRVV VTETGWPSKG DSNEPDATVE NANTYNSNLI KHVLNITGTP 300 KHPGIGVSTY IYELYNEDAK AGPLSEKNWG LFDANGKPVY VLHLTESGGV LANDTTNQTY 360 CVAKDGADPK MLQAGIDWAC GPGKVDCSPL LQGQPCYEPD NVVAHANYAF DTYYHQMGKS 420 PQSCDFNGMA TISTTNPSHG SCVFPGSLGN NGTFPNVTLS SMNSTNSDSS ACNLHSGELG 480 IRSLLMVIVL LLWGVALL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-8 | 255 | 335 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 7.0e-21 | 359 | 431 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-41 | 359 | 444 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 3.0e-80 | 23 | 340 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK85402.2 | 0 | 10 | 471 | 9 | 470 | beta-1,3-glucanase [Camellia sinensis] |
GenBank | ABN08070.1 | 0 | 1 | 498 | 1 | 497 | Glycoside hydrolase, family 17; Virulence factor, pectin lyase fold; X8 [Medicago truncatula] |
EMBL | CBI33479.1 | 0 | 16 | 472 | 15 | 471 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002305879.1 | 0 | 20 | 498 | 14 | 491 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531922.1 | 0 | 19 | 492 | 30 | 504 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 23 | 344 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 23 | 344 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 23 | 344 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 23 | 344 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 23 | 344 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |