Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.001G204900.2 |
Family | CBM43 |
Protein Properties | Length: 551 Molecular Weight: 60647.7 Isoelectric Point: 5.0477 |
Chromosome | Chromosome/Scaffold: 01 Start: 39872393 End: 39875923 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 463 | 541 | 2.7e-28 |
CTAKEGADPKMLQAALDWACGPGKVDCSPLLQGKPCYEPDNVIAHATYAFDTYYHRMGKTSDACDFNGVADITTTDPSK | |||
GH17 | 125 | 444 | 0 |
IGVNIGTDLSIMPHPTQVVALLKAQQIRHIRLYDADRGMLVALANSGIRVMVSIPNEQLLGIGQSNSTAANWVSRNIVAHYPATNITAICVGSEVLTTLP NAARILVNAMKFIHSALVASNLDNQIKVSSPLASSIILDSFPPSQAFFNRSWNPVLVPMLNFLQSTGSYLMLNIYPYYDYMQSNGVIPLDYALFKPLSPT KEAVDANTLVHYSNVFDAMVDATYFAMAFLNFTNIPVIVTETGWPSKGDSNEPDATMENANTYNSNLIRHVMNKTGTPKRPGIAVSTYIYELYNEDLKPG PSSEKNWGLFDANGDPIYIL |
Full Sequence |
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Protein Sequence Length: 551 Download |
MQLPYHVADD ILAVHLLSIF ITCFYVPCFV FLLALPSLFF TLFSHLFLII LLALLSLSLI 60 FLQHCPTFFP VVSIFLSSLF FSIVVSSLQL WVSFVSPENS EMAWLLILVL VFAVSQATAD 120 EEPYIGVNIG TDLSIMPHPT QVVALLKAQQ IRHIRLYDAD RGMLVALANS GIRVMVSIPN 180 EQLLGIGQSN STAANWVSRN IVAHYPATNI TAICVGSEVL TTLPNAARIL VNAMKFIHSA 240 LVASNLDNQI KVSSPLASSI ILDSFPPSQA FFNRSWNPVL VPMLNFLQST GSYLMLNIYP 300 YYDYMQSNGV IPLDYALFKP LSPTKEAVDA NTLVHYSNVF DAMVDATYFA MAFLNFTNIP 360 VIVTETGWPS KGDSNEPDAT MENANTYNSN LIRHVMNKTG TPKRPGIAVS TYIYELYNED 420 LKPGPSSEKN WGLFDANGDP IYILRLTDSG SLLANDTTNQ TYCTAKEGAD PKMLQAALDW 480 ACGPGKVDCS PLLQGKPCYE PDNVIAHATY AFDTYYHRMG KTSDACDFNG VADITTTDPS 540 KMNQYHASHA * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-8 | 357 | 437 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-19 | 461 | 532 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-35 | 461 | 540 | 80 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-94 | 125 | 442 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI33479.1 | 0 | 119 | 540 | 16 | 437 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002265396.1 | 0 | 119 | 540 | 16 | 437 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301689.1 | 0 | 121 | 540 | 5 | 424 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002305879.1 | 0 | 122 | 540 | 14 | 432 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531922.1 | 0 | 121 | 540 | 30 | 449 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 125 | 442 | 1 | 308 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 125 | 447 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 125 | 447 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 125 | 447 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 125 | 447 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |