| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.005G159100.1 |
| Family | CBM43 |
| Protein Properties | Length: 498 Molecular Weight: 53216.4 Isoelectric Point: 5.1535 |
| Chromosome | Chromosome/Scaffold: 05 Start: 45757529 End: 45760756 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 361 | 442 | 7.6e-31 |
| CIAKRGADPKMLQAALDWACGPGKVDCSPLLLGHPCYEPDNVASHSTYAFNAYYQRMAKSPGTCDFKGVATITTSDPSHGSC | |||
| GH17 | 23 | 342 | 0 |
| IGVNIGTDLSDMPTPTEVVALLKAQRIRHVRLYDADQAMLLALAKTGIQVTVSVPNDQLLGIGQSNATAANWVARNIVAHVPATNITAIAVGSEVLTALP NAAPILVSALKFIHSALVASNLDDQIKVSTPHSSSIILDSFPPSQAFFNRSWDPVMVPLLKFLQSTGSYLMLNVYPYYDYMQSNGKIPLDYALFRPLPPN KEAVDANTLLHYTNVFDAVVDAAYFAMSYLNFTNIPIVVTESGWPSKGDSSEPDAIVDNANTYNSNLIKHVLNNTGTPKHPGIAVSTYIYELYNEDLRPG SDSEKNWGLFDANGIPVYTL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 498 Download |
| MAIFLLLLLL LVSAVSGDED AYIGVNIGTD LSDMPTPTEV VALLKAQRIR HVRLYDADQA 60 MLLALAKTGI QVTVSVPNDQ LLGIGQSNAT AANWVARNIV AHVPATNITA IAVGSEVLTA 120 LPNAAPILVS ALKFIHSALV ASNLDDQIKV STPHSSSIIL DSFPPSQAFF NRSWDPVMVP 180 LLKFLQSTGS YLMLNVYPYY DYMQSNGKIP LDYALFRPLP PNKEAVDANT LLHYTNVFDA 240 VVDAAYFAMS YLNFTNIPIV VTESGWPSKG DSSEPDAIVD NANTYNSNLI KHVLNNTGTP 300 KHPGIAVSTY IYELYNEDLR PGSDSEKNWG LFDANGIPVY TLHLTGADTV FANDTTNKTF 360 CIAKRGADPK MLQAALDWAC GPGKVDCSPL LLGHPCYEPD NVASHSTYAF NAYYQRMAKS 420 PGTCDFKGVA TITTSDPSHG SCIFPGSSGK NGTLINGTSL APSSNDTSSA RPPQSYGTGS 480 FTTSVMIGVL LTGAVFL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 7.0e-7 | 255 | 335 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 4.0e-18 | 359 | 431 | 82 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-38 | 359 | 444 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-82 | 23 | 342 | 320 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI26850.1 | 0 | 13 | 462 | 13 | 462 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002312452.1 | 0 | 20 | 497 | 1 | 479 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002314794.1 | 0 | 6 | 497 | 1 | 493 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527772.1 | 0 | 1 | 483 | 1 | 484 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| RefSeq | XP_002531922.1 | 0 | 19 | 491 | 30 | 502 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 23 | 344 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 23 | 345 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 23 | 345 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 23 | 345 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 23 | 345 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
