Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G028300.1 |
Family | CBM43 |
Protein Properties | Length: 490 Molecular Weight: 53735.5 Isoelectric Point: 6.5975 |
Chromosome | Chromosome/Scaffold: 09 Start: 2178384 End: 2180962 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 392 | 470 | 3e-31 |
WCIASSQASNSALQNALDWACGQGKADCSAIQPGQRCFQPDTLVSHASFAFNNYYQKNGATDDACSFGGTGIKVSTDPR | |||
GH17 | 252 | 383 | 5.6e-33 |
TTRNTFDAQPDTVHFTLANTNSRINDIIVTETGWPTHGSRPPHASTHNAKTYNYGASLDSVDDYANIDNAQTYNTNLISHVMGGSGTPAMPGANLDVYIF SLFNENLKQGPEIERNFGLFDPEMRSVYNLNF | |||
GH17 | 26 | 249 | 0 |
VGVDYGMDADNLPSPDQVAQLVRNHNIQYLRIYNYRPEVLKAFSNTGIELMVGVPNADLSQFQSQPYVDSWLRTSILPYYPATKITHITVGVEVTNYPDN TANLVVPAMRNVVSALKSANLQGKIKVSTPLSFGVLSKSFPPSEGAFNSGYENVLRLLLDFLEENQSPFMVNLYPIYAIGASSLDAVLFKSPSTIFVDQH TGLSYKNIFDAQLDAVFYAIANRN |
Full Sequence |
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Protein Sequence Length: 490 Download |
MASRFKLVSA LSLLLLLLDF CRGSNVGVDY GMDADNLPSP DQVAQLVRNH NIQYLRIYNY 60 RPEVLKAFSN TGIELMVGVP NADLSQFQSQ PYVDSWLRTS ILPYYPATKI THITVGVEVT 120 NYPDNTANLV VPAMRNVVSA LKSANLQGKI KVSTPLSFGV LSKSFPPSEG AFNSGYENVL 180 RLLLDFLEEN QSPFMVNLYP IYAIGASSLD AVLFKSPSTI FVDQHTGLSY KNIFDAQLDA 240 VFYAIANRNF RTTRNTFDAQ PDTVHFTLAN TNSRINDIIV TETGWPTHGS RPPHASTHNA 300 KTYNYGASLD SVDDYANIDN AQTYNTNLIS HVMGGSGTPA MPGANLDVYI FSLFNENLKQ 360 GPEIERNFGL FDPEMRSVYN LNFPGKGTGK SWCIASSQAS NSALQNALDW ACGQGKADCS 420 AIQPGQRCFQ PDTLVSHASF AFNNYYQKNG ATDDACSFGG TGIKVSTDPR LPKLQPVGRL 480 PLLQLSRFF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.007 | 277 | 371 | 97 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 6.0e-17 | 391 | 463 | 82 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-30 | 391 | 469 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 6.0e-88 | 26 | 383 | 363 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABD91576.1 | 0 | 5 | 469 | 7 | 447 | beta-1,3-glucanase [Medicago sativa] |
GenBank | ABD91577.1 | 0 | 5 | 469 | 7 | 447 | beta-1,3-glucanase [Medicago sativa] |
RefSeq | XP_002283473.1 | 0 | 1 | 469 | 1 | 442 | PREDICTED: similar to beta-1,3-glucanase [Vitis vinifera] |
RefSeq | XP_002330523.1 | 0 | 21 | 469 | 22 | 444 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514201.1 | 0 | 1 | 469 | 1 | 444 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 383 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 26 | 383 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 26 | 383 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 26 | 383 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 26 | 383 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |