Basic Information | |
---|---|
Species | Medicago truncatula |
Cazyme ID | Medtr3g083580.1 |
Family | CBM43 |
Protein Properties | Length: 499 Molecular Weight: 54226.3 Isoelectric Point: 6.4506 |
Chromosome | Chromosome/Scaffold: 3 Start: 26999986 End: 27003025 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 363 | 444 | 1.2e-31 |
CVAKDGADAEKMEAGLDWACGQGRANCAAIQAGRPCYFPNDVKSHASYAYNDYYQKMNSVGGTCDFDDTAMITTEDPSHGSC | |||
GH17 | 26 | 348 | 0 |
VGVNIGTHVTDLPSASNIVAILKSHQITHVRLYDANAHMLQALSNTGIELLVGVTDEEILRIGESPSVAATWISKNVAAYMPHTNITTIAVGSEVLTSIP NVARVLVPAMNHLHSALVASNLHFRVKISTPQSMDLIPKPFPPSTATFNSSWNSTIHQILQFLKNTNSSYMLNAHPYYGYTKGDGIFPIEYALLRSLPST KKIVDPNTLFRYDSMFDAMVDATYYSIQALNFNDIRIIVTETGWPHLGGSNEPDASLENAETYNNNLIRRVLNDSGPPSQPKMAINTYIYELFDEDKRTG PISERHWGLFYTTNGSSVYPLSF |
Full Sequence |
---|
Protein Sequence Length: 499 Download |
MKLQKWLTSL FLLTLATINN VLGAFVGVNI GTHVTDLPSA SNIVAILKSH QITHVRLYDA 60 NAHMLQALSN TGIELLVGVT DEEILRIGES PSVAATWISK NVAAYMPHTN ITTIAVGSEV 120 LTSIPNVARV LVPAMNHLHS ALVASNLHFR VKISTPQSMD LIPKPFPPST ATFNSSWNST 180 IHQILQFLKN TNSSYMLNAH PYYGYTKGDG IFPIEYALLR SLPSTKKIVD PNTLFRYDSM 240 FDAMVDATYY SIQALNFNDI RIIVTETGWP HLGGSNEPDA SLENAETYNN NLIRRVLNDS 300 GPPSQPKMAI NTYIYELFDE DKRTGPISER HWGLFYTTNG SSVYPLSFSS SNKVFGNSSK 360 SFCVAKDGAD AEKMEAGLDW ACGQGRANCA AIQAGRPCYF PNDVKSHASY AYNDYYQKMN 420 SVGGTCDFDD TAMITTEDPS HGSCIYAGSS NLSTGGDGSF SSIAFGPVSP NIGAGLKLQL 480 TSLHYAFSST SLLLALML* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0004 | 252 | 336 | 88 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 6.0e-21 | 361 | 433 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-39 | 361 | 446 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-82 | 26 | 348 | 323 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAH57260.1 | 0 | 1 | 441 | 1 | 441 | AT3G13560 [Arabidopsis thaliana] |
EMBL | CAN72077.1 | 0 | 27 | 449 | 27 | 448 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_187965.1 | 0 | 1 | 470 | 1 | 469 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002283548.1 | 0 | 27 | 446 | 27 | 445 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002297638.1 | 0 | 37 | 497 | 1 | 461 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 348 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 26 | 349 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 26 | 349 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 26 | 349 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 26 | 349 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |