Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr4g132280.1 |
Family | CBM43 |
Protein Properties | Length: 523 Molecular Weight: 57250.2 Isoelectric Point: 5.776 |
Chromosome | Chromosome/Scaffold: 4 Start: 46728930 End: 46732223 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 383 | 465 | 6.7e-34 |
CIAMDGFDSKTLQAALDWACGPGRANCSEIQPGESCYKPNNVKNHASYAFDSYYQKEGKAPGSCDFKGVAMITTTDPSHGSCE | |||
GH17 | 45 | 364 | 0 |
IGVNIGTDVENMASTSDIVSFLKLQKITHVRIYDANPDILKSLSGTKIRVIISVPNNQLLAIGSSNTTAASWIQRNVVAYYPQTLITGISVGDEVLTTVP SSAPLLLPAMESLYNALVSSNLHQQIKVSTPHAASVILDPFPPSQAFFNQTLVSVLLPILQFLSKTESPLMMNLYPYYVFMQNKGVVPLDNALFRPVTPS KEMVDPNTLLHYTNVLDAMIDSAYFSMKNLNVTDVVVLVTETGWPSKGDSKEPYATKDNADTYNSNLIKHVFDHSGTPLNPETTSSVFIYELFNEDLRSP PVSEANWGLFYGNMSAVYLL |
Full Sequence |
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Protein Sequence Length: 523 Download |
MANFNNLILL FSILSFSFLS ISIPGESSHF QIKLENEEQE RGPFIGVNIG TDVENMASTS 60 DIVSFLKLQK ITHVRIYDAN PDILKSLSGT KIRVIISVPN NQLLAIGSSN TTAASWIQRN 120 VVAYYPQTLI TGISVGDEVL TTVPSSAPLL LPAMESLYNA LVSSNLHQQI KVSTPHAASV 180 ILDPFPPSQA FFNQTLVSVL LPILQFLSKT ESPLMMNLYP YYVFMQNKGV VPLDNALFRP 240 VTPSKEMVDP NTLLHYTNVL DAMIDSAYFS MKNLNVTDVV VLVTETGWPS KGDSKEPYAT 300 KDNADTYNSN LIKHVFDHSG TPLNPETTSS VFIYELFNED LRSPPVSEAN WGLFYGNMSA 360 VYLLHVSGIG TFLANDTTNQ TYCIAMDGFD SKTLQAALDW ACGPGRANCS EIQPGESCYK 420 PNNVKNHASY AFDSYYQKEG KAPGSCDFKG VAMITTTDPS HGSCEFPGSK NVSNKTKEVV 480 NSTHTSSAGE KLRFRSIKIN TVNNILRILL TTCIPALLLV LS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 7.0e-5 | 285 | 357 | 76 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-23 | 381 | 453 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-42 | 381 | 466 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 6.0e-84 | 45 | 362 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC17632.1 | 0 | 23 | 460 | 22 | 459 | Similar to glucan endo-1,3-beta-D-glucosidase precursor gb |
EMBL | CBI23232.1 | 0 | 1 | 497 | 11 | 499 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002316541.1 | 0 | 58 | 520 | 2 | 467 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332610.1 | 0 | 58 | 520 | 2 | 467 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518468.1 | 0 | 43 | 520 | 48 | 528 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 45 | 362 | 1 | 308 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 45 | 367 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 45 | 367 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 45 | 367 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 45 | 367 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |