Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr5g078200.1 |
Family | CBM43 |
Protein Properties | Length: 643 Molecular Weight: 69254.7 Isoelectric Point: 4.6495 |
Chromosome | Chromosome/Scaffold: 5 Start: 32414043 End: 32418084 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 361 | 442 | 1.1e-30 |
CIAKDGADPKMIQAALDWACGPGKVECSSLLQGQPCYEPDNVIAHANYAFDSYYNKMGRTPDSCDFKGVATITTSDPSHGSC | |||
GH17 | 23 | 342 | 0 |
IGVNIGTSLSDMPHPTQVVALLKAQKIQNVRLYDADQAMLVALAKTGIQVVITVPNEQILAIGQSNASAANWVSRNVVAHYPATNITAICVGSEVLTTLP NVAKVLVNAIKYIHSALVASNLDRQVKVSTPLPSSIILDSFPPSQAFFNRSLNSVLIPILDFLQSTDSYLMLNIYPYYDYMQSNGVIPLDYALFKPLPPN KEAVDSNTLLHYSNVFDAMVDAAYFAMAFLNYTNIPVVVTESGWPSKGAANEPDATIDNANNYNSNLIKHVFNKTGTPKHPGIAVSTYIYELYNEDTKSG PLSEKNWGLFDANGVPIYIL |
Full Sequence |
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Protein Sequence Length: 643 Download |
MALHFLLMLF AVSLVAADDA PFIGVNIGTS LSDMPHPTQV VALLKAQKIQ NVRLYDADQA 60 MLVALAKTGI QVVITVPNEQ ILAIGQSNAS AANWVSRNVV AHYPATNITA ICVGSEVLTT 120 LPNVAKVLVN AIKYIHSALV ASNLDRQVKV STPLPSSIIL DSFPPSQAFF NRSLNSVLIP 180 ILDFLQSTDS YLMLNIYPYY DYMQSNGVIP LDYALFKPLP PNKEAVDSNT LLHYSNVFDA 240 MVDAAYFAMA FLNYTNIPVV VTESGWPSKG AANEPDATID NANNYNSNLI KHVFNKTGTP 300 KHPGIAVSTY IYELYNEDTK SGPLSEKNWG LFDANGVPIY ILHLAGSGAV LANDTSNQTF 360 CIAKDGADPK MIQAALDWAC GPGKVECSSL LQGQPCYEPD NVIAHANYAF DSYYNKMGRT 420 PDSCDFKGVA TITTSDPSHG SCVYPGSLGK NNTFGNFTAP SMNSSSDSSA YNIHSCELRI 480 RSLLVVTGFL ILGVVLVYVV LCNILFQESR VFMLNPKLVV HNSFAMLQVD CENPSGETLL 540 ADHELHAESQ DMQRVINDSG IEASNGNAGL ESGFDIEALA TLASSSLDST LLPGAMPQPI 600 TTYHASLSAD KLPILELVNT PVHDGVVCSS ADQRCVDILQ QF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-6 | 46 | 335 | 297 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 4.0e-19 | 359 | 431 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-38 | 359 | 444 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 9.0e-91 | 23 | 340 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK85402.2 | 0 | 10 | 466 | 9 | 465 | beta-1,3-glucanase [Camellia sinensis] |
GenBank | ABN08070.1 | 0 | 1 | 497 | 1 | 497 | Glycoside hydrolase, family 17; Virulence factor, pectin lyase fold; X8 [Medicago truncatula] |
EMBL | CBI33479.1 | 0 | 15 | 470 | 14 | 469 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002301689.1 | 0 | 15 | 506 | 1 | 480 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531922.1 | 0 | 19 | 495 | 30 | 508 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 23 | 340 | 1 | 308 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 23 | 344 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 23 | 344 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 23 | 344 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 23 | 344 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |