Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr8g102340.1 |
Family | CBM43 |
Protein Properties | Length: 493 Molecular Weight: 54753.4 Isoelectric Point: 7.854 |
Chromosome | Chromosome/Scaffold: 8 Start: 29799139 End: 29801856 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 334 | 412 | 2.7e-29 |
WCIASSKASEIDLQNALDWACGPGNVDCTAVQPSQPCFEPDNLASHASYVFNSYYQQNGASDVACSFGGTGVKIDKDPS | |||
GH17 | 54 | 312 | 0 |
SFSQFQSNADAWIKNSVLPYYPATKVTYITVGAEVTESSYNTSSLVVPAMNNVLTALKKLGLHKKIKVSSTHSLGVLSRSFPPSAGAFNSSHAHFLKPML EFLAENQSPFMIDIYPYYAYRDSRNKVSLDYALFQASSEVIDPNTGLLYTNMFDAQIDAIYYALMALNFRTIKVMVTETGWPSKGSPKEKAATPDNAQTY NTNLIRHVINNTGTPAKLGQELDVYIFSLFNENRKPGLESERNWGLFYPDQTSVYNLDF |
Full Sequence |
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Protein Sequence Length: 493 Download |
MAARFSFSFI FAASLFLLLL DCCSGSFIGI CYGRNADDLP TPDKVAQLGL YLLSFSQFQS 60 NADAWIKNSV LPYYPATKVT YITVGAEVTE SSYNTSSLVV PAMNNVLTAL KKLGLHKKIK 120 VSSTHSLGVL SRSFPPSAGA FNSSHAHFLK PMLEFLAENQ SPFMIDIYPY YAYRDSRNKV 180 SLDYALFQAS SEVIDPNTGL LYTNMFDAQI DAIYYALMAL NFRTIKVMVT ETGWPSKGSP 240 KEKAATPDNA QTYNTNLIRH VINNTGTPAK LGQELDVYIF SLFNENRKPG LESERNWGLF 300 YPDQTSVYNL DFTGRGAVDM TTAANVTRSN RTTWCIASSK ASEIDLQNAL DWACGPGNVD 360 CTAVQPSQPC FEPDNLASHA SYVFNSYYQQ NGASDVACSF GGTGVKIDKD PSMFITTLSP 420 IQLFCSLLYR LFFVQKLLHT YIKYDLKKAT TTASTCEMAI TKLREVTQGR CRQLHPPNKK 480 EFVTLQFLFI FL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-10 | 48 | 303 | 259 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-20 | 333 | 405 | 82 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-34 | 333 | 413 | 81 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-92 | 28 | 312 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABD91576.1 | 0 | 1 | 412 | 1 | 448 | beta-1,3-glucanase [Medicago sativa] |
GenBank | ABD91577.1 | 0 | 1 | 412 | 1 | 448 | beta-1,3-glucanase [Medicago sativa] |
RefSeq | XP_002283473.1 | 0 | 7 | 419 | 5 | 454 | PREDICTED: similar to beta-1,3-glucanase [Vitis vinifera] |
RefSeq | XP_002330523.1 | 0 | 23 | 412 | 22 | 445 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514201.1 | 0 | 7 | 417 | 5 | 454 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 28 | 312 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 28 | 312 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 28 | 312 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 0 | 28 | 313 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 0 | 28 | 313 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |